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Record W4386314734 · doi:10.56588/iabcd.v2i2.97

COMPUTATIONAL ANALYSIS OF TRANSCRIPTION FACTORS AS CANCER DRUG TARGETS WITH POTENTIAL INHIBITORS FROM THE NPACT DATABASE

2023· article· en· W4386314734 on OpenAlexaff
Pooja Prajapati, Chirag Patel, Saumya Patel, Rakesh Rawal, Bharat Maitreya

Bibliographic record

VenueInternational Association of Biologicals and Computational Digest · 2023
Typearticle
Languageen
FieldMedicine
TopicPhytochemicals and Medicinal Plants
Canadian institutionsImpact
Fundersnot available
KeywordsTranscription factorDocking (animal)Transcription (linguistics)Computational biologyBiologyDrug discoveryChemistryCancer cellCancer researchBioinformaticsCell biologyGeneticsCancerGeneMedicine

Abstract

fetched live from OpenAlex

Transcription factors have proven to be promising targets for the treatment of cancer. Transcription factors are involved in the production of oxygen. External cervical events are initiated by receptors, such as cytotoxic exposures or cytokine receptors that trigger signalling cascades that activate transcription factors. Transcriptional factors are known to be highly active in most human cancer cells, making them suitable for the study and development of anticancer therapies. Three transcription factors were investigated as potential targets in this study. Analysis of string interactions reveals their interaction network. DNA-TF binding was followed by docking with 96 natural compounds to the DNA binding pocket of the transcription factor. Using post-docking processing, compounds were ranked according to their binding energy, hydrogen bond number, and dissociation constant; Withanolide D targeted more than one transcription factor. Therefore, the compound is suitable for in vitro testing using different cancer cell lines.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.022

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0070.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.285
Teacher spread0.270 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes1
Has abstractyes

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Same venueInternational Association of Biologicals and Computational DigestSame topicPhytochemicals and Medicinal PlantsFrench-language works237,207