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Record W4386466865 · doi:10.1093/evolut/qpad160

The fitness landscape of a community of Darwin’s finches

2023· article· en· W4386466865 on OpenAlexafffund
Marc‐Olivier Beausoleil, Paola Carrion‐Avilés, Jeffrey Podos, Carlos Camacho, Julio Rabadán‐González, Roxanne Richard, Kristen Lalla, Joost A. M. Raeymaekers, Sarah A. Knutie, Luis F. De León, Jaime A. Chaves, Dale H. Clayton, Jennifer A. H. Koop, Diana M. T. Sharpe, Kiyoko M. Gotanda, Sarah K. Huber, Rowan D. H. Barrett, Andrew P. Hendry

Bibliographic record

VenueEvolution · 2023
Typearticle
Languageen
FieldEnvironmental Science
TopicSpecies Distribution and Climate Change
Canadian institutionsBrock UniversityUniversité de SherbrookeMcGill University
FundersChrist's College, University of CambridgeNewnham College, University of CambridgeNatural Sciences and Engineering Research Council of CanadaNational Park ServiceEuropean Society for Evolutionary BiologyBritish Elbow and Shoulder SocietyBritish Ornithologists' UnionNational Geographic SocietyEarthwatch InstituteFonds Québécois de la Recherche sur la Nature et les TechnologiesNational Science Foundation
KeywordsAdaptive radiationFitness landscapeBiologyNatural selectionEcologyAdaptive evolutionDarwin (ADL)Adaptation (eye)Adaptive valueAdaptive strategiesEvolutionary biologySelection (genetic algorithm)PopulationDemographyPhylogeneticsGeographyMachine learning

Abstract

fetched live from OpenAlex

Divergent natural selection should lead to adaptive radiation-that is, the rapid evolution of phenotypic and ecological diversity originating from a single clade. The drivers of adaptive radiation have often been conceptualized through the concept of "adaptive landscapes," yet formal empirical estimates of adaptive landscapes for natural adaptive radiations have proven elusive. Here, we use a 17-year dataset of Darwin's ground finches (Geospiza spp.) at an intensively studied site on Santa Cruz (Galápagos) to estimate individual apparent lifespan in relation to beak traits. We use these estimates to model a multi-species fitness landscape, which we also convert to a formal adaptive landscape. We then assess the correspondence between estimated fitness peaks and observed phenotypes for each of five phenotypic modes (G. fuliginosa, G. fortis [small and large morphotypes], G. magnirostris, and G. scandens). The fitness and adaptive landscapes show 5 and 4 peaks, respectively, and, as expected, the adaptive landscape was smoother than the fitness landscape. Each of the five phenotypic modes appeared reasonably close to the corresponding fitness peak, yet interesting deviations were also documented and examined. By estimating adaptive landscapes in an ongoing adaptive radiation, our study demonstrates their utility as a quantitative tool for exploring and predicting adaptive radiation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.468
Threshold uncertainty score0.997

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0040.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.258
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations20
Published2023
Admission routes2
Has abstractyes

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