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Record W4386467241 · doi:10.1002/mrd.23700

Trimethylation profile of histones H3 lysine 4 and 9 in late preantral and early antral caprine follicles grown in vivo versus in vitro in the presence of anethole

2023· article· en· W4386467241 on OpenAlex
Ana Flávia Bezerra da Silva, Ana N. P. Morais, Laritza Ferreira de Lima, Anna Clara Accioly Ferreira, Renato F. Silva, Naíza Arcângela Ribeiro de Sá, Satish Kumar, Ariclécio Cunha de Oliveira, Bênner Geraldo Alves, Ana Paula Ribeiro Rodrigues, E.L. Gastal, Vilceu Bordignon, J.R. Figueiredo

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueMolecular Reproduction and Development · 2023
Typearticle
Languageen
FieldMedicine
TopicReproductive Biology and Fertility
Canadian institutionsMcGill University
FundersCoordenação de Aperfeiçoamento de Pessoal de Nível Superior
KeywordsBiologyIn vivoMethylationFollicleAntral follicleH3K4me3In vitroMolecular biologyAndrologyEndocrinologyGene expressionBiochemistryFollicular phasePromoterGeneGenetics

Abstract

fetched live from OpenAlex

Abstract This study assessed the histones methylation profile (H3K4me3 and H3K9me3) in late preantral (PA) and early antral (EA) caprine follicles grown in vivo and in vitro, and the anethole effect during in vitro culture of PA follicles. Uncultured in vivo–grown follicles (PA, n = 64; EA, n = 73) were used as controls to assess the methylation profile and genes' expression related to apoptosis cascade ( BAX , proapoptotic; BCL2 , antiapoptotic), steroidogenesis ( CYP17 , CYP19A1 ), and demethylation ( KDM1AX1 , KDM1AX2 , KDM3A ). The isolated PA follicles ( n = 174) were cultured in vitro for 6 days in α‐MEM + in either absence (control) or presence of anethole. After culture, EA follicles were evaluated for methylation, mRNA abundance, and morphometry. Follicle diameter increased after culture, regardless of treatment. The methylation profile and the mRNA abundance were similar between in vivo–grown PA and EA follicles. Anethole treatment led to higher H3K4me3 fluorescence intensity in EA follicles. The mRNA abundances of BAX , CYP17 , and CYP19A1 were higher, and BCL2 and KDM3A were lower in in vitro–grown EA follicles than in vivo–grown follicles. In conclusion, in vitro follicle culture affected H3K4me3 fluorescence intensity, mRNA abundance of apoptotic genes, and steroidogenic and demethylase enzymes compared with in vivo–grown follicles.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.436
Threshold uncertainty score0.259

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.278
Teacher spread0.252 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it