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Record W4386861110 · doi:10.1002/csc2.21106

Exploring the trait‐yield association patterns in different oat mega‐environments of Canada

2023· article· en· W4386861110 on OpenAlexaffabout
Weikai Yan, Mehri Hadinezhad, Brad DeHaan, Matt Hayes, Savka Orozovic, Kirby T. Nilsen, Dan MacEachern, Genevieve Telmosse, Aaron D. Beattie, Helen Booker, Holly P. Byker, Allan Cummiskey, Isabelle Morasse, Nathan Mountain, Melinda Drummond, Zhanghan Zhang, Michael Holzworth, Julie Durand, Yuanhong Chen

Bibliographic record

VenueCrop Science · 2023
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicGenetics and Plant Breeding
Canadian institutionsUniversity of GuelphHéma-QuébecVeterans Affairs CanadaHealth PEIUniversity of Prince Edward IslandUniversity of SaskatchewanBrandon UniversityNational Association of Friendship Centres
Fundersnot available
KeywordsBiplotRust (programming language)Test weightTraitAvenaBiologyYield (engineering)AgronomyCrown (dentistry)AmmiCropStatisticsMathematicsGene–environment interactionCultivarGenotype

Abstract

fetched live from OpenAlex

Abstract This article presents a graphical method to visually analyze the trait–yield association (TYA) patterns based on data from multi‐location, multi‐year crop variety trials, exemplified using oat data from trials conducted across Canada from 2017 to 2022. Each year a new set of 60–66 oat ( Avena sativa L.) breeding lines were tested in replicated yield trials at 9–11 locations, and data for yield, key agronomic and quality traits, and crown rust scores were collected at all or some of the locations. Pearson correlation coefficient was calculated between yield and each trait for each trial. The correlation coefficients from different locations and years were arranged in a TYA × trial (TYT) two‐way table. This table was subjected to singular value decomposition, and the resulting first two principal components were used to generate a TYT biplot. The TYT biplot revealed three oat mega‐environments (MEs) in Canada, consistent with the conclusion from previous ME analyses, indicating that each ME had its characteristic TYA patterns. It was found that yield was consistently and positively correlated with crown rust ( Puccinia coronata var. avenae ) resistance, test weight, kernel weight, and groat content in ME1 (the crown rust‐prone regions of Ontario); yield was correlated positively with plant height but negatively with oil content in ME2 (the northern regions of eastern Canada). Interestingly, crown rust resistance was found to contribute negatively to yield in ME2. No strong and consistent TYAs were found in ME3 (the Canadian prairies). Different types of TYAs have different uses in genotypic selection.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.655
Threshold uncertainty score0.948

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.103
GPT teacher head0.194
Teacher spread0.092 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2023
Admission routes2
Has abstractyes

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