MétaCan
Menu
← Back to cohort
Record W4387104185 · doi:10.1101/2023.09.26.23295361

An unsupervised machine learning approach to predict recovery from traumatic spinal cord injury

2023· preprint· en· W4387104185 on OpenAlexaff
Sarah C. Brüningk, Lucie Bourguignon, Louis P. Lukas, Doris Maier, Rainer Abel, Norbert Weidner, Rüdiger Rupp, Fred H. Geisler, John L. K. Kramer, James D. Guest, Armin Curt, Catherine R. Jutzeler

Bibliographic record

VenuemedRxiv · 2023
Typepreprint
Languageen
FieldMedicine
TopicSpinal Cord Injury Research
Canadian institutionsUniversity of British ColumbiaInternational Collaboration On Repair DiscoveriesVancouver Coastal HealthUniversity of Saskatchewan
FundersInternational Foundation for Research in ParaplegiaWings for LifeSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungNational Science Foundation
KeywordsSpinal cord injuryRehabilitationPhysical medicine and rehabilitationMean squared errorMatching (statistics)MedicinePhysical therapyClinical trialPopulationArtificial intelligenceSpinal cordMachine learningComputer scienceStatisticsMathematicsInternal medicine

Abstract

fetched live from OpenAlex

Abstract Background Neurological and functional recovery after traumatic spinal cord injury (SCI) is highly heterogeneous, challenging outcome predictions in rehabilitation and clinical trials. We propose k-nearest neighbour (k-NN) matching as a data-driven, interpretable solution. Methods This study used acute-phase International Standards for Neurological Classification of SCI exams to forecast 6-month recovery motor function as primary evaluation endpoint. Secondary endpoints included severity grade improvement, independent walking, and self-care ability. Different similarity metrics were explored for NN matching within 1267 patients from the European Multicenter Study about Spinal Cord Injury before validation in 411 patients from the Sygen trial. Results We obtained a population-wide root-mean-squared error (RMSE) in motor score sequence of 0.76(0.14, 2.77) and competitive functional score predictions (AUC walker =0.92, AUC self-carer =0.83). The validation cohort showed comparable results (RMSE = 0.75(0.13, 2.57), AUC walker =0.92). Prediction performance in AIS grade B and C patients (∼30%) showed the largest deviations from true recovery scores, in line with large SCI heterogeneity. Conclusions Our approach provides detailed predictions of neurological and functional recovery based on a highly interpretable unsupervised machine learning concept. The k-NN matching strategy further enables the integration of historical control data into the evaluation of clinical trials and provides a data-driven digital twin for recovery trajectory exploration.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.008
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.003
Threshold uncertainty score0.017

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.008
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.124
GPT teacher head0.389
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2023
Admission routes1
Has abstractyes

Explore more

Same venuemedRxiv→Same topicSpinal Cord Injury Research→French-language works237,207→