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Record W4387157013 · doi:10.1128/mra.00626-23

Draft genome sequences of four <i>Staphylococcus hyicus</i> strains, SC302, SC304, SC306, and SC310, isolated from swine from Eastern Canada

2023· article· en· W4387157013 on OpenAlexafffundabout
Cynthia Gagné-Thivierge, Antony T. Vincent, Valérie E. Paquet, Marie-Lou Gauthier, Martine Denicourt, Marie-Ève Lambert, Steve J. Charette

Bibliographic record

VenueMicrobiology Resource Announcements · 2023
Typearticle
Languageen
FieldMedicine
TopicAntimicrobial Resistance in Staphylococcus
Canadian institutionsCegep de Saint HyacintheFonds de Recherche du Québec - SantéMinistère de l'Agriculture, des Pêcheries et de l'AlimentationUniversité Laval
FundersNatural Sciences and Engineering Research Council of CanadaGovernment of CanadaMinistère de l'Agriculture, des Pêcheries et de l'Alimentation
KeywordsGenomeBiologyPathogenMicrobiologyStaphylococcusStaphylococcus aureusWhole genome sequencingBacteriaGeneticsGene

Abstract

fetched live from OpenAlex

ABSTRACT The bacterium Staphylococcus hyicus causes porcine exudative epidermitis in piglets, which represents both health and welfare concerns. Few genome sequences of this pathogen are published. We provide four additional ones to help future genomic analysis of S. hyicus . These are genomes of strains isolated from Canadian swine.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.512
Threshold uncertainty score0.971

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0030.007
Science and technology studies0.0020.000
Scholarly communication0.0020.000
Open science0.0010.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0080.005

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.235
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2023
Admission routes3
Has abstractyes

Explore more

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