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Record W4387244229 · doi:10.1101/2023.10.01.560360

Inferring plasticity rules from single-neuron spike trains using deep learning methods

2023· preprint· en· W4387244229 on OpenAlexaff
Xingyun Wang, Jean-Claude Béı̈que, Richard Naud

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldEngineering
TopicAdvanced Memory and Neural Computing
Canadian institutionsUniversity of Ottawa
Fundersnot available
KeywordsComputer scienceArtificial intelligenceLearning ruleClassifier (UML)Machine learningConvolutional neural networkSynaptic plasticitySpike-timing-dependent plasticityTransformerDeep learningArtificial neural networkPattern recognition (psychology)

Abstract

fetched live from OpenAlex

Abstract Synaptic plasticity is a core basis for learning and adaptation. Determining how synapses are altered by local signals – the learning rules – is the hinge about which brain activity pivots. A large number of in vitro characterizations have focused on restricted sets of core properties, but it remains to be established which if any of the known learning rules is most consistent with changes in activity patterns in behaving animals. To address this question, we hypothesize that the correlation between features of the activity of a single post-synaptic neuron and subsequent changes of the representations could be used to detect the underlying learning rule. Because this correlation is expected to be diluted in the notoriously large variability of brain activity, we test here learning rule inference based on passive observations of single neurons using deep artificial neural networks. Using simulated data, we found that both transformers, temporal convolutional networks, and SVM could classify learning rules far above the chance level, with transformers achieving the best overall accuracy. This performance can be achieved despite the presence of noise and representational drift. We further investigated the features used by the algorithms to perform the classification and found the deep net used inner temporal differences of distinct learning rules to separate learning trajectories. We also find, however, that the classification accuracy is sensitive to alterations in network properties. Our work illustrates that distinct learning rules’ generate distinguishable trajectories of responses, but warns against using simulation-trained classifiers to infer learning rules from real data.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.004
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.053
GPT teacher head0.275
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes1
Has abstractyes

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