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A framework for recalibrating pedotransfer functions using nonlinear least squares and estimating uncertainty using quantile regression

2023· article· en· W4387276448 on OpenAlex
Adrienne Arbor, Margaret Schmidt, Daniel D. Saurette, Chuck Bulmer, Deepa Filatow, Babak Kasraei, Sean Smukler, Brandon Heung

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenueGeoderma · 2023
Typearticle
Languageen
FieldEngineering
TopicSoil and Unsaturated Flow
Canadian institutionsDalhousie UniversityMinistry of ForestsUniversity of British ColumbiaGovernment of British ColumbiaMinistry of Agriculture, Food and Rural AffairsSimon Fraser University
Fundersnot available
KeywordsPedotransfer functionMean squared errorStatisticsMathematicsQuantileNonlinear regressionQuantile regressionRegression analysisSoil scienceSoil waterEnvironmental science

Abstract

fetched live from OpenAlex

Pedotransfer functions (PTFs) have been developed for many regions to estimate values missing from soil profile databases. However, globally there are many areas without existing PTFs, and it is not advisable to use PTFs outside their domain of development due to poor performance. Further, developed PTFs often lack accompanying uncertainty estimations. To address these issues, a framework is proposed where existing equation-based PTFs are recalibrated using a nonlinear least squares (NLS) approach and validated on two regions of Canada; this process is coupled with the use of quantile regression (QR) to generate uncertainty estimates. Many PTFs have been developed to predict soil bulk density, so this variable is used as a case study to evaluate the outcome of recalibration. New coefficients are generated for existing soil bulk density PTFs, and the performance of these PTFs is validated using three case study datasets, one from the Ottawa region of Ontario and two from the province of British Columbia, Canada. The improvement of the performance of the recalibrated PTFs is evaluated using root mean square error (RMSE) and the concordance correlation coefficient (CCC). Uncertainty estimates produced using QR are communicated through the mean prediction interval (MPI) and prediction interval coverage probability (PICP) graphs. This framework produces dataset-specific PTFs with improved accuracy and minimized uncertainty, and the method can be applied to other regional datasets to improve the estimations of existing PTF model forms. The methods are most successful with large datasets and PTFs with fewer variables and minimal transformations; further, PTFs with organic carbon (OC) as one of or the sole input variable resulted in the highest accuracy.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.074
Threshold uncertainty score0.720

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.049
GPT teacher head0.300
Teacher spread0.252 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it