MétaCan
Menu
← Back to cohort
Record W4387308280 · doi:10.3389/fimmu.2023.1277466

Editorial: In vitro cellular technologies for advancing research in anamniote vertebrate immunology

2023· editorial· en· W4387308280 on OpenAlexaffabout
Nguyen T. K. Vo, Tamiru N. Alkie, Alberto Cuesta, Eva‐Stina Edholm

Bibliographic record

VenueFrontiers in Immunology · 2023
Typeeditorial
Languageen
FieldImmunology and Microbiology
TopicAquaculture disease management and microbiota
Canadian institutionsWilfrid Laurier University
FundersAgencia Estatal de Investigación
KeywordsImmunologyTumor immunologyBiologyMedicineImmune systemImmunotherapy

Abstract

fetched live from OpenAlex

In vitro cellular technologies nowadays are indispensable tools, adding tremendous values in the advancement of compara=ve immunology research. These technologies encompass isola=on of primary cells from embryos and mature species, applica=ons of permanent/con=nuous cell lines to study innate and adap=ve immune func=ons/responses, and the development of novel imaging methods to visualize intracellular processes in immune cells. For many decades, cellular technologies have been ac=vely sought and used to respond to specific scien=fic research needs, ul=mately in the pursuit of making discoveries as well as transla=ng knowledge into prac=cal applica=ons. This Research Topic collec=on in the Fron=ers of Immunology journal focuses on teleost fish and amphibian immune systems. Through knowledge dissemina=on in both original research and cri=cal literature review approaches, this collec=on includes five ar=cles from researchers around the world who reported advances in in vitro cellular technologies that provided new insights into our understanding of anamniote vertebrate immunology.The first ar=cle was a contribu=on from Lizhu Tao and colleagues from China and Portugal. Their research focused on the regulatory role of a microRNA named miR-142a-3p in inflammatory responses in grass carp (Ctenopharyngodon idella) infected with Aeromonas hydrophila (a Gram-nega=ve bacterium). A. hydrophila causes serious inflammatory condi=ons in infected grass carp; therefore, unravelling the inflammatory processes involved is important to understand the disease progression. As part of the epigene=c programming, microRNAs bind to the target regions of specific genes, leading to the ac=va=on or suppression of a series of immunological responses. The authors iden=fied the targets of miR-142a-3p to be tnfaip2 and glut3 genes. They found that A. hydrophila infec=on caused increased miR-142a-3p expressions in infected fish =ssues. Using the permanent grass carp kidney CIK cell line, the authors demonstrated that miR-142a-3p promoted cell death. As the kidney is a primary hematopoie=c =ssue in fish, the outcome of cellular death in the kidney could result in severe and generalized pathophysiological altera=ons. The authors also used primary cultures of Kupffer cells (=ssue resident macrophages) to further explore the roles of miR-142a-3p. They revealed that miR-142a-3p down-regulated proinflammatory responses and enhanced an=-inflammatory responses in Kupffer cells. Overall, their work provides new insights into the involvement of microRNAs in general and miR-142a-3p in par=cular in inflammatory responses during bacterial infec=ons in grass carp. To this end, grass carp primary cultures and cell lines are valuable in vitro tools for genera=ng accurate and rapid immunological data that align well with in vivo findings.The second ar=cle was originated from Amro Soliman and colleagues from Canada. Their research was focused on mapping the profile and kine=cs of leukocyte biology and responses during the acute phase of cutaneous inflammatory condi=ons in goldfish (Carassius auratus). Isola=ng leukocytes from connec=ve =ssue-dense organs such as the skin of fish and amphibians is difficult and cumbersome; however, the authors successfully innovated a leukocyte isola=on method specific for fish skin -a major accomplishment to furthering their research. The study revealed that neutrophils and monocytes/macrophages cons=tuted the majority of the inflammatory leukocytes in goldfish skin. This correlated well with the pro-inflammatory gene expression profile. Furthermore, the authors performed a flow cytometry-based imaging technique to visualize the profile and kine=cs of reac=ve oxygen species and nitric oxide produc=on in isolated skin leukocytes. Overall, their research allows us to have a more defined picture of the phagocyte profile that contributes to the induc=on and resolu=on of cutaneous inflamma=on condi=ons in fish.The third ar=cle contributed by Li=ng Wu and colleagues from China and the United States explored plasma cell-like popula=on in the head kidney of Nile =lapia (Oreochromis nilo=cus). They sorted IgM + B cells from a whole head kidney leukocyte prepara=on using flow cytometry and further characterized the cell phenotype with confocal and electron microscopy and cytological staining. Furthermore, they analyzed the spectrum of gene and protein expressions and func=onal assays and confirmed that these IgM + bearing B cells in the head kidney of =lapia resembled plasma cells. Their research enriches our understanding of the role of fish B lymphocytes in the adap=ve immune system.The fourth ar=cle was a comprehensive review paper by Helmut Segner and colleagues from Switzerland, Spain, and China. They discussed in detail the current state of in vitro assays using primary and permanent/con=nuous cell lines to assess immunotoxicological effects of various chemicals in teleost fishes. The authors also iden=fied the limita=ons of in vitro cell-based assays in ecotoxicological risk assessments of fish immune func=ons. While many efforts have been made to advance the field of in vitro immunotoxicology for teleost fishes, the authors emphasized that more collabora=ve works must be done to apply the predic=ve poten=al of results generated in in vitro assays to have as an impacKul contribu=on as the in vivo systems in decision making.The fiph ar=cle contribu=on was from Yun Tian and colleagues from the United States. Their research iden=fied microRNAs and non-coding regulatory elements from the whole transcriptome of an amphibian-infec=ng ranavirus. The authors further showed using in vitro frog kidney A6 cells that some of these viral miRNAs targeted and silenced important genes that were part of the interferon-mediated an=viral immune pathways. Collec=vely, their work demonstrated the existence of an epigene=c co-evolu=on mechanism at play between a frog virus and its host's innate an=viral immune responses.In summary, this Research Topic collec=on highlights the innova=on of in vitro cellular technologies in various areas in anamniote vertebrate immunology. The five ar=cle contribu=ons clearly demonstrate that more than ever these technologies are technical catalysts that are indispensable in research to allow us to shed new lights on immunological func=ons in teleost fishes and amphibians.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.006
metaresearch head score (Gemma)0.017
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Editorial · Consensus signal: Editorial
Teacher disagreement score0.017
Threshold uncertainty score0.059

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0060.017
Meta-epidemiology (narrow)0.0040.001
Meta-epidemiology (broad)0.0030.003
Bibliometrics0.0040.002
Science and technology studies0.0020.003
Scholarly communication0.0060.005
Open science0.0040.001
Research integrity0.0110.014
Insufficient payload (model declined to judge)0.0170.014

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.275
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreEditorial

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes2
Has abstractyes

Explore more

Same venueFrontiers in Immunology→Same topicAquaculture disease management and microbiota→French-language works237,207→