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Record W4387569563 · doi:10.3389/fmolb.2023.1303286

Editorial: Exploring and expanding the protein universe with non-canonical amino acids

2023· editorial· en· W4387569563 on OpenAlexaff
Gustavo Fuertes, Kensaku Sakamoto, Nediljko Budiša

Bibliographic record

VenueFrontiers in Molecular Biosciences · 2023
Typeeditorial
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRNA and protein synthesis mechanisms
Canadian institutionsUniversity of Manitoba
FundersAkademie Věd České Republiky
KeywordsGenetic codeAmino acidBiomedicineUniverseComputational biologyNon canonicalField (mathematics)RepertoireGenomeBiologyPhysicsGenetics

Abstract

fetched live from OpenAlex

In just 30 years, genetic code engineering has allowed us to expand the repertoire of amino acids in 9proteins from nature's 20 canonical to more than 250 non-canonical (ncAAs) ones including also non-10 α-amino acids (Fricke et Undoubtedly, the unexplored potential of ncAAs will attract researchers from diverse disciplines, 84 including AI, material science, biophysics, biomedicine, and evolutionary biology, among others, to 85 engage in this captivating field. Thanks to these collaborative endeavors, the boundaries of the protein 86 universe and life itself will be pushed, explored, and expanded. 87

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Editorial · Consensus signal: Editorial
Teacher disagreement score0.090
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.232
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreEditorial

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2023
Admission routes1
Has abstractyes

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