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Record W4387574029 · doi:10.1007/s11101-023-09895-8

Proanthocyanidin biosynthesis and postharvest seed coat darkening in pinto bean

2023· review· en· W4387574029 on OpenAlexafffund
Nishat S. Islam, Sangeeta Dhaubhadel

Bibliographic record

VenuePhytochemistry Reviews · 2023
Typereview
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Gene Expression Analysis
Canadian institutionsAgriculture and Agri-Food CanadaWestern University
FundersAgriculture and Agri-Food CanadaNatural Sciences and Engineering Research Council of Canada
KeywordsPostharvestPhaseolusCoatProanthocyanidinBiologyGerminationPhenylpropanoidBotanyPolyphenolAbiotic componentHorticulturePinto beanBiosynthesisFood scienceAgronomyAntioxidantBiochemistry

Abstract

fetched live from OpenAlex

Abstract Proanthocyanidins (PAs) are polyphenolic compounds present widely in the plant kingdom. These specialized metabolites are derived from the phenylpropanoid pathway and are known for producing brown pigments in different plant organs. PAs accumulate in the seed coat tissues of flowering plants and play a determinant role in seed germination and viability, protect seeds from biotic and abiotic stresses, and thus ensure the long-term storage potential of seeds. In addition, PAs are a rich source of antioxidants for the health of both human and livestock. Many of the commercially relevant dry beans ( Phaseolus vulgaris ) contain high levels of PAs, which when oxidized cause the beans to overdarken, a phenomenon known as postharvest darkening. These darker beans give the impression of oldness, and consumers tend to avoid buying them which, in turn, affects their market value. Pinto beans, one of the leading market classes of dry beans, are affected the most by the postharvest darkening. Therefore, exploring the regulation of PA biosynthesis and accumulation in bean seed coat tissues will help to develop strategy to manage the postharvest darkening effect in pintos. In this review, we discuss the PA biosynthesis and its regulation, connecting it to seed coat color genetics for a better understanding of the mechanism of seed coat darkening.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.078
GPT teacher head0.359
Teacher spread0.280 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations11
Published2023
Admission routes2
Has abstractyes

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