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Record W4387768852 · doi:10.1093/biolinnean/blad054

Evolutionary history of <i>Magnolia</i> sect. <i>Talauma</i> (Magnoliaceae) in Cuba

2023· article· en· W4387768852 on OpenAlexaff
Ernesto Testé, Majela Hernández Rodríguez, Salvador Guzmán-Díaz, Alejandro Palmarola, Emily Veltjen, Eldis R. Bécquer, Fabian A. Aldaba-Núñez, Marie‐Stéphanie Samain, Luis Roberto González-Torres, Thierry Robert

Bibliographic record

VenueBiological Journal of the Linnean Society · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant biochemistry and biosynthesis
Canadian institutionsDouglas College
FundersUniversiteit GentUniversidad de La HabanaCampus FranceWhitley Fund for Nature
KeywordsBiologyTaxonMonophylyPhylogenetic treeMagnoliaceaeEvolutionary biologyTaxonomy (biology)SectPhylogeneticsChloroplast DNAPopulationCladeZoologyEcologyBotanyGeneticsDemography

Abstract

fetched live from OpenAlex

Abstract Evolutionary biologists recognize that understanding the phylogenetic history of closely related species is challenging without considering their population genetics history. The taxonomy of Magnolia sect. Talauma in Cuba has long been debated, with several changes in taxon delimitations. All these taxonomic revisions were based exclusively on leaf morphological characteristics of a few individuals, limiting their ability to elucidate taxon boundaries. Recent studies have focused on conservation genetics and species delimitation of Cuban magnolias, based on ecological, morphological and genetic data. Here, we use full plastome sequences and microsatellite data to infer phylogenetic relationships and potential historical migration events among species in Magnolia sect. Talauma in Cuba. Bayesian phylogeny and TreeMix were used to understand the phylogenetic relationships. Based on this, Magnolia sect. Talauma in Cuba does not comprise a monophyletic group. The data continue to show a highly supported unresolved species complex in the taxa of Magnolia subsect. Talauma from north-eastern Cuba. From a taxonomic point of view, our results do not entirely support the most recent taxonomic review proposed for the family in Cuba.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.071
Threshold uncertainty score0.141

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.218
Teacher spread0.195 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2023
Admission routes1
Has abstractyes

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