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Record W4387827378 · doi:10.1016/j.eswa.2023.122209

Measurement of adverse cosmesis in breast cancer: A deep learning approach

2023· article· en· W4387827378 on OpenAlexafffund
Ashirbani Saha, Mark N. Levine, Isaac Kong, Elena Parvez, Timothy J. Whelan

Bibliographic record

VenueExpert Systems with Applications · 2023
Typearticle
Languageen
FieldComputer Science
TopicAI in cancer detection
Canadian institutionsMcMaster UniversityJuravinski HospitalJuravinski Cancer Centre
FundersHamilton Health Sciences Foundation
KeywordsCosmesisArtificial intelligenceComputer scienceSupport vector machinePreprocessorReceiver operating characteristicBreast cancerMedicineMachine learningMedical physicsCancerInternal medicine

Abstract

fetched live from OpenAlex

Background and Purpose Adverse cosmesis or poor aesthetic appearance of the breast after breast conservation surgery (BCS) and/or radiation therapy (RT) is highly correlated with quality-of-life (QOL) in breast cancer patients. Existing methods for objective assessment of cosmesis utilize human-designed features that are calculated using outlines and/or key-points from breasts. These are complicated and time consuming to obtain. Our purpose is to develop and validate a deep neural network (DNN)-based approach for classifying adverse cosmesis from frontal digital images of patients who have undergone BCS and RT using an approximate region-of-interest (ROI) containing the breast. Materials and Methods We used 6 datasets (5 from BCS/RT-related clinical trials) to conduct our study. Training subsets (80% of patients) from 3 datasets (RAPID, OPAR, and PORTO) were used to train 3 independent support vector classifiers for classifying adverse cosmesis using the features extracted from preprocessed, approximate breast ROIs passed through a pretrained DNN, called ResNet-18. The trained classifiers/models were evaluated through 5 experiments: holdout validation, treatment-arm specific validation in RAPID, external validation (included datasets from the remaining 3 trials), assessment of the effect of preprocessing, and comparison with BCCT.core software. Area-under-the receiver operating characteristics (AUC) was used as the primary evaluation measure. Treatment-arm specific probability values were compared by the Mann-Whitney U test. Results AUC (0.78, 0.88, 0.94) values increased from RAPID to OPAR and PORTO respectively for holdout validation. The median probability of adverse cosmesis was higher in the same treatment arm in accordance with the interim results of the RAPID trial and differed significantly between the treatment arms (p = 0.006). For external validation, best AUC values were obtained by the model trained in RAPID (AUCs > 0.78). Preprocessing improved the performance to a large extent (average AUC: 0.87 vs 0.79 for internal validation, 0.78 vs 0.64 for external validation). AUCs of the individual models using DNN-based features were higher in 7 of 9 validation tests and statistically similar to the human-designed, dimensionless features extracted from BCCT.core software. Conclusion Appropriately preprocessed, approximate breast ROIs can be represented by DNN-based features to identify adverse cosmesis from frontal images of breast cancer patients treated with BCS/RT. Adaptations to this approach may be necessary for its applicability to images with non-frontal views and different quality. This work serves as a foundation for developing robust DNN-based platforms for evaluating cosmesis in clinical trials.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.991
Threshold uncertainty score0.414

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.002
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.254
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2023
Admission routes2
Has abstractyes

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