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Record W4388291537 · doi:10.21203/rs.3.rs-3470871/v1

A precision medicine approach to coronary artery disease risk prediction and mitigation in people with type 2 diabetes

2023· preprint· en· W4388291537 on OpenAlexaff
Paul W. Franks, Daniel Coral, Juan Fernández‐Tajes, Marie Pigeyre, Michael Chong, Naeimeh Atabaki‐Pasdar, Hugo Fitipaldi, Sebastian Kalamajski, Maria F. Gomez, Guillaume Paré, Giuseppe N. Giordano, Ewan R. Pearson

Bibliographic record

VenueResearch Square · 2023
Typepreprint
Languageen
FieldMedicine
TopicCardiovascular Function and Risk Factors
Canadian institutionsPopulation Health Research InstituteMcMaster University
FundersNovo NordiskEli Lilly and Company
KeywordsCoronary artery diseaseType 2 diabetesInternal medicineCardiologyMedicineDiabetes mellitusDiseaseEndocrinology

Abstract

fetched live from OpenAlex

Abstract Type 2 diabetes (T2D) predisposes to cardiovascular disease (CVD), but it is still unclear why some individuals with T2D are at disproportionately higher or lower risk. In this study, we employed a genetic stratification method to investigate the main clinical features that differ between two diabetogenic profiles associated concordantly with susceptibility for CVD or discordantly with protection against CVD. Quantifying concordant and discordant genetic predispositions improved CVD risk prediction, especially in men, correctly reassigning higher predicted risk to 5.4% of new male cases of MACE in UK Biobank. Moreover, higher genetically determined discordance reduced the risk associated with MACE in men. In-depth comparisons across a wide spectrum of phenotypes uncovered significant disparities between these two profiles. Subsequent causal inference analyses highlighted critical features of very-low-density lipoprotein particles influencing the discordance between T2D and CVD. We prioritized 8 distinct discordant genomic loci with potential protective effects traits against CVD in individuals with T2D. These findings provide clinically relevant valuable insights for personalized approaches to prevent and treat CVD in individuals with T2D.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.013
metaresearch head score (Gemma)0.031
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.013
Threshold uncertainty score0.066

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0130.031
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0030.001
Open science0.0010.002
Research integrity0.0010.003
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.328
Teacher spread0.287 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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