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Quantitative ultrasound inflammation biomarker on a COVID-19 cohort

2023· article· en· W4388447739 on OpenAlexafffund
Boris Chayer, François Destrempes, Marie‐Hélène Roy Cardinal, Louise Allard, Hassan Rivaz, Madéleine Durand, William Beaubien‐Souligny, Martin Girard, Guy Cloutier

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldEngineering
TopicPhotoacoustic and Ultrasonic Imaging
Canadian institutionsConcordia UniversityUniversité de Montréal
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsBiomarkerMedicineUltrasoundImaging biomarkerCoronavirus disease 2019 (COVID-19)ThrombosisBiomedical engineeringRadiologyAggregate (composite)Nuclear medicineCardiologyInternal medicineMaterials scienceBiology

Abstract

fetched live from OpenAlex

The aim of the current work was to quantify the red blood cells (RBCs) aggregate size in Covid-19 positive patients at risk of developing vascular thrombosis and compare results with control subjects. For this purpose, the current work relied on the effective medium theory combined with the structure factor model that was proposed for RBCs aggregate size estimation. Ten Covid-19 positive patients and twelve control subjects underwent superficial femoral vein and artery imaging sessions. Ultrasound acquisitions consisted in beamformed I&Q frames for each vessel. Backscatter coefficients (BSCs) were computed with the reference phantom method. The EMTSFM was then applied on BSCs yielding an estimation of the RBCs aggregate size (used as a biomarker), and its ancillary aggregate compactness, whilst the theoretical total attenuation, which is based on published values for dermis, muscles and blood, was refined. Increased RBCs aggregate sizes were observed in virus infected Covid-19 patients in comparison with control subjects. The mean aggregate size over the region of interest within vessel exhibited a statistically significant difference between Covid-19 patients and control subjects for veins (p= 0.0279) and arteries (p=0.0252), based on the rank sum test.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.292
Teacher spread0.260 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes2
Has abstractyes

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