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Integration and coevolution of the mammalian skeleton in “real time”: the case of the Longshanks mouse

2017· article· en· W4389021475 on OpenAlexafffundabout
Campbell Rolian

Bibliographic record

VenueThe FASEB Journal · 2017
Typearticle
Languageen
FieldMathematics
TopicMorphological variations and asymmetry
Canadian institutionsUniversity of Calgary
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsEvolvabilityBiologyEvolutionary biologyModularity (biology)Selection (genetic algorithm)Quantitative geneticsCoevolutionLife history theoryGeneticsGenetic variationEcologyLife historyGeneComputer scienceArtificial intelligence

Abstract

fetched live from OpenAlex

Since the publication of Olson and Miller's seminal book “Morphological Integration” in 1958, there have been over 200 studies on integration, modularity and evolvability of the mammalian skeletal and dental systems. These studies have yielded fundamental insights into the role of genetic, developmental and functional constraints on the evolutionary history, and evolutionary potential, of complex skeletal traits in diverse mammalian lineages. Yet integration and evolvability studies in skeletal systems suffer from two important limitations. First, they are by nature post‐hoc, i.e., they rely on observed patterns of covariation among traits to reconstruct the (often deep) history of (co)evolution in skeletal traits, and/or to identify the genetic, developmental and functional sources of covariation that have influenced this history. Second, and related, evolvability studies are theoretical, relying on the multivariate breeder's equation to predict the potential response of more or less integrated skeletal phenotypes to selection. Since 2010, my lab has been selectively breeding mice for increases in tibia length relative to body mass. This long‐term selection experiment provides an opportunity to validate empirically how the magnitude and pattern of covariation among skeletal traits (i.e., integration) impacts “real time” evolutionary change in the target of selection, as well as in genetically and developmentally correlated traits. Here, I use an evolutionary quantitative genetics framework and a large multi‐generational dataset of full body micro‐CT scans of the selectively bred mice (Longshanks) and random‐bred mice to: (1) quantify correlated evolution of skeletal traits in the Longshanks postcranium and cranium, and (2) determine how the magnitude and pattern of integration across the skeleton has evolved in response to strong selection on a single trait. Results show that while tibia length has changed the most, other skeletal traits (e.g. tibia cross‐sectional shape, other fore‐ and hind limb bone lengths) have also responded to selection, though to a lesser extent (i.e., allometrically). Interestingly, skull shape in Longshanks has changed significantly. The types of changes observed over ontogeny suggest the involvement of both local and systemic factors underlying mechanisms of endochondral ossification in the limbs and cranial base. Finally, the magnitude of covariation among postcranial skeletal traits increased over generations, which suggests that unidirectional selection on a single skeletal trait in Longshanks has actually reduced the evolvability of its skeleton overall. This study in “real time” vertebrate evolution thus validates and complements the insights gleaned from classical, yet largely theoretical, integration, modularity and evolvability in the mammalian skeleton. Support or Funding Information This work was supported by NSERC Discovery Grant 4181932, and by the Faculty of Veterinary Medicine at the University of Calgary.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.513
Threshold uncertainty score0.482

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.292
Teacher spread0.255 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2017
Admission routes3
Has abstractyes

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