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Identification of Vesicular Monoamine Transporter 2 (vmat2)‐Containing O <sub>2</sub> Chemoreceptors in the Gills of Zebrafish

2017· article· en· W4389021609 on OpenAlexaffabout
Wen Pan, Angela L. Scott, Colin A. Nurse, Michael G. Jonz

Bibliographic record

VenueThe FASEB Journal · 2017
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicZebrafish Biomedical Research Applications
Canadian institutionsMcMaster UniversityUniversity of Ottawa
Fundersnot available
KeywordsBiologyMonoamine neurotransmitterZebrafishCell biologyVesicular monoamine transporter 2GillVesicular monoamine transporterGreen fluorescent proteinChemoreceptorSerotoninPopulationNeurotransmitterIntracellularBiochemistryNeuroscienceCentral nervous system

Abstract

fetched live from OpenAlex

All vertebrates “sense” changes in oxygen (O 2 ) via specialized cells, called chemoreceptors, associated with the peripheral nervous system. Aquatic vertebrates are especially prone to fluctuations in environmental O 2 levels. Thus it is essential for them to readily detect low O 2 and make appropriate ventilatory adjustments. Teleost species, such as zebrafish, have O 2 chemoreceptive neuroepithelial cells (NECs) embedded in the gill epithelium. These cells exhibit membrane depolarization and vesicular recycling upon exposure to hypoxia, and express the monoamine neurotransmitter, serotonin (5‐HT). Our research objectives are to identify gill O 2 chemoreceptors in live tissue preparations and determine the role of intracellular Ca 2+ in O 2 sensing. We are currently employing a transgenic zebrafish line, expressing green fluorescent protein (GFP) under the control of vesicular monoamine transporter 2 (vmat2) regulatory elements, in order to identify NECs and characterize their hypoxic responses in vitro and in situ . Immunohistochemistry and confocal microscopy were used to determine the distribution and identity of GFP‐positive cells in gills. Our results show that the population of GFP‐positive cells in our transgenic line significantly overlaps with serotonergic NECs in the gill filaments. Preliminary studies using fura 2‐based imaging indicate that isolated GFP‐positive cells stimulated by hypoxia undergo an increase in intracellular Ca 2+ concentration. Identification of NECs both in vitro and in situ using a vital marker will have a great impact on future work addressing the physiological properties of these cells. Support or Funding Information This research project is funded by Natural Sciences and Engineering Research Council of Canada (NSERC).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.273
Teacher spread0.260 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes2
Has abstractyes

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