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RGDSK Peptide Functionalized Helical Rosette Nanotubes (RGDSK‐HRNs) Block Integrin αvβ3 and Inhibit <i>E. coli</i> Adherence to Intestinal Porcine Epithelial 1 Cell Line (IPEC1) <i>in vitro</i>

2017· article· en· W4389023602 on OpenAlexafffundabout
Nguyen Phuong Khanh Le, Chi Cuong Quach, Gurpreet Kaur Aulakh, Volker Gerdts, Hicham Fenniri, Baljit Singh

Bibliographic record

VenueThe FASEB Journal · 2017
Typearticle
Languageen
FieldMedicine
TopicCell Adhesion Molecules Research
Canadian institutionsUniversity of CalgaryUniversity of Saskatchewan
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsIntegrinMolecular biologyAdhesionIntegrin alpha MBiologyCell adhesionEpitheliumIntestinal epitheliumCell biologyChemistryCellBiochemistryFlow cytometry

Abstract

fetched live from OpenAlex

E. coli infection is a leading cause of intestinal disease and death, and inflicts billions of dollars in economic losses. There is ongoing effort to find ways to reduce intestinal colonization by E. coli . Integrin αvβ3, recognizing arginine‐glycine‐aspartic acid (RGD) sequences, has important functions in cell adhesion, signaling and survival. However, the expression and role of integrin αvβ3 in the adhesion of E. coli on intestinal epithelium remain unknown. We used porcine jejunum, IPEC1 cells and E. coli K88 to firstly explored the hitherto unknown expression of integrin αvβ3 with light, fluorescent and electron immunocytochemistry, immunoprecipitation and Western blots. We then used RGDSK peptide and RGDSK‐HRNs to test the role of integrin αvβ3 in adhesion of E. coli K88 to IPEC1 cells. Normal porcine jejunum strongly expresses integrin αvβ3 on the nucleus and apical surface of epithelium and gland cells. The expression of integrin αvβ3 decreased in the epithelium but increased on vascular endothelium of the jejunum infected with E. coli or E. coli associated with Salmonella . Integrin αvβ3 was found on plasma membrane, cytoplasm, and nucleus of IPEC1 cells. The expression of integrin αvβ3 on IPEC1 decreased at 15 minutes but returned to normal after 90 minutes of infection with E. coli K88 (P<0.05). Immuno‐gold quantification showed changes in sub‐cellular expression of the integrin αvβ3 in IPEC1. The light, fluorescent and electron microscopy, and western blots showed novel expression of integrin αvβ3 on E. coli K88. Finally, we found that RGDSK peptides and RGDSK‐HRNs bind integrin αvβ3 on both IPEC1 and E. coli K88. RGDSK peptides block the attachment of E. coli to IPEC1 (5 minutes IPEC1 exposed to 50μM RGDSK, P<0.05), and reduce survival of E. coli (10 minutes IPEC1 exposed to 50μM RGDSK, P<0.05). Dose dependent RGDSK‐HRNs mediates the attachment of E. coli to IPEC1 more efficiently and regularly (10 minutes IPEC1 exposed to HRNs containing equivalent 5μM RGDSK, P<0.001). These are the first data to show a role for the integrin αvβ3 in the attachment of E. coli to the intestinal epithelium, and that novel RGDSK helical rosette nanotubes can inhibit the attachment of E. coli to the epithelium. Support or Funding Information Saskatchewan Agriculture Development Fund and NSERC

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.301
Teacher spread0.270 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes3
Has abstractyes

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