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Functional Characterization of SM22 during <i>Listeria monocytogenes</i> Infections

2016· article· en· W4389027153 on OpenAlexafffund
Kevin Jay Hipolito, Michael Dominic Chua, Julian Solway, Julian A. Guttman

Bibliographic record

VenueThe FASEB Journal · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicListeria monocytogenes in Food Safety
Canadian institutionsSimon Fraser University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsListeriaListeria monocytogenesBiologyActinCell biologyBacteriaCellShigellaMicrobiologyBiochemistryGenetics

Abstract

fetched live from OpenAlex

To cause disease, Listeria monocytogenes invades the human intestinal epithelia then spreads to other tissues. Once the bacterium invades host cells, it hijacks the host actin machinery to generate an actin‐rich structure called a comet tail that propels the bacterium within the host cells. When these motile bacteria reach the plasma membrane, these comet tails protrude the membrane forming listeriopods for cell‐to‐cell spreading of the microbes. In our previous work, we identified the 22 kilodalton smooth muscle protein (SM22) as an actin‐associated component of enteropathogenic Escherichia coli pedestals. To further characterize the role of SM22 in bacterial infections, we hypothesized that SM22 would also play a crucial role in the formation and elongation of Listeria ‐induced comet tails. To test this hypothesis, we immunolocalized Listeria ‐infected HeLa cells and found that SM22 localized along the full length of the comet tail. Live imaging of infected cells transfected with fluorescently‐tagged SM22 showed identical results. To study the functional role of SM22 during the infections, we used small interfering RNA (siRNA) to knock‐down SM22 protein levels. In cells with reduced levels of SM22, we observed that the actin cytoskeleton in the host cell remained unchanged, however less comet tails were evident and those that were present appeared shorter in length. Thus, depleting SM22 impairs the formation and elongation of Listeria ‐induced comet tails. Taken together with our previous findings, SM22 is emerging as a general protein hijacked by a variety of gastrointestinal bacteria for their disease processes. Support or Funding Information This study was funded through NSERC.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.043
GPT teacher head0.269
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes2
Has abstractyes

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