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Sarco/Endoplasmic Reticulum Ca2+‐ATPase 2 (SERCA2) is Present at Tubulobulbar Complexes

2016· article· en· W4389034378 on OpenAlexafffundabout
Kevin Lyon, A. Wayne Vogl

Bibliographic record

VenueThe FASEB Journal · 2016
Typearticle
Languageen
FieldMedicine
TopicSperm and Testicular Function
Canadian institutionsUniversity of British Columbia
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsEndoplasmic reticulumCell biologyPlasma membrane Ca2+ ATPaseSertoli cellEndocytic cycleChemistryBiologyBiophysicsEndocytosisATPaseCellBiochemistryEndocrinologySpermatogenesis

Abstract

fetched live from OpenAlex

Endocytic structures known as tubulobulbar complexes (TBCs) internalize intact intercellular junction proteins at sites of intercellular attachment between spermatids and Sertoli cells prior to sperm release. TBCs are highly specialized clathrin‐based endocytosis machines. They also resemble podosomes which have an elongated membrane tube and an associated dendritic actin network. However, unlike podosomes that have a membrane core of a single plasma membrane, the core of TBCs consists of two plasma membranes: the membrane of the Sertoli cell which the structure is invaginated into and the membrane of a spermatid. TBCs have a bulb region in the distal third part of the complex which does not have the cuff of actin but is closely associated with a cisterna of endoplasmic reticulum (ER). We hypothesize that the plasma membrane/ER junction is involved in Ca 2+ signaling. If this is true then we would expect to find molecular machinery involved in calcium signaling mechanisms in other systems. In this study, we used immunofluorescence to probe for the calcium pump, sarco/endoplasmic reticulum Ca 2+ ‐ATPase 2 (SERCA2), which pumps Ca 2+ into the ER. Cryosections and epithelial fragments from perfusion‐fixed rat testes were probed with antibodies against SERCA2 and an appropriate fluorescent secondary antibody. The SERCA2 antibody has a labeling pattern that extends from the base of the epithelium to the apex which is consistent with a Sertoli cell pattern. As seen in both epithelial fragments and cryosections, the SERCA2 antibody labels regions where we would expect TBCs to be. Our results show that one possible component of a calcium signaling mechanism is present in regions containing TBCs. Support or Funding Information Supported by the Natural Sciences and Engineering Research Council of Canada Discovery Grants program.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.252
Teacher spread0.231 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes3
Has abstractyes

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