MétaCan
Menu
Back to cohort

Characterization of 2,4-Dianilinopyrimidines Against Five <i>P. falciparum</i> Kinases PfARK1, PfARK3, PfNEK3, PfPK9, and PfPKB

2023· article· en· W4389043310 on OpenAlexfundno aff
Han Wee Ong, Chandi de Silva, Krisha Avalani, Frank E. Kwarcinski, Christopher R. Mansfield, Michael E. Chirgwin, Anna Truong, Emily R. Derbyshire, Reena Zutshi, David H. Drewry

Bibliographic record

VenueACS Medicinal Chemistry Letters · 2023
Typearticle
Languageen
FieldMedicine
TopicMalaria Research and Control
Canadian institutionsnot available
FundersDivision of ChemistryGenentechOntario Genomics InstituteEuropean Federation of Pharmaceutical Industries and AssociationsStructural Genomics ConsortiumMerck KGaANational Institutes of HealthOntario GenomicsGenome CanadaMcGill UniversityNational Institute of Allergy and Infectious DiseasesBayerBristol-Myers SquibbDivision of Graduate EducationPfizerNational Science Foundation
KeywordsKinasePlasmodium falciparumPotencyBiochemistryStructure–activity relationshipProtein-Serine-Threonine KinasesComputational biologyBiologyIn vitroPharmacologyChemistryMalariaProtein kinase AImmunology

Abstract

fetched live from OpenAlex

High Resolution Image Download MS PowerPoint Slide Plasmodium kinases are increasingly recognized as potential novel antiplasmodial targets for the treatment of malaria, but only a small subset of these kinases have had structure–activity relationship (SAR) campaigns reported. Herein we report the discovery of CZC-54252 ( 1 ) as an inhibitor of five P. falciparum kinases PfARK1, PfARK3, PfNEK3, PfPK9, and PfPKB. 39 analogues were evaluated against all five kinases to establish SAR at three regions of the kinase active site. Nanomolar inhibitors of each kinase were discovered. We identified common and divergent SAR trends across all five kinases, highlighting substituents in each region that improve potency and selectivity for each kinase. Potent analogues were evaluated against the P. falciparum blood stage. Eight submicromolar inhibitors were discovered, of which 37 demonstrated potent antiplasmodial activity (EC 50 = 0.16 μM). Our results provide an understanding of features needed to inhibit each individual kinase and lay groundwork for future optimization efforts toward novel antimalarials.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.030
Threshold uncertainty score0.941

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.255
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2023
Admission routes1
Has abstractyes

Explore more

Same venueACS Medicinal Chemistry LettersSame topicMalaria Research and ControlFrench-language works237,207