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Record W4389044866 · doi:10.1101/2023.11.23.568449

Fatty acid oxidation drives hydrogen peroxide production by α-ketoglutarate dehydrogenase

2023· preprint· en· W4389044866 on OpenAlexafffund
Cathryn Grayson, Ben Faerman, Olivia Koufos, Ryan J. Mailloux

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMitochondrial Function and Pathology
Canadian institutionsMcGill University
FundersCanadian Institutes of Health ResearchUniversities Space Research AssociationNatural Sciences and Engineering Research Council of CanadaMcGill University
KeywordsMitochondrionBiochemistryPyruvate decarboxylationCarnitineOxidative phosphorylationOxidizing agentPyruvate dehydrogenase complexBeta oxidationDehydrogenaseBiologyChemistryMetabolismEnzymeOrganic chemistry

Abstract

fetched live from OpenAlex

Here, we conducted the first in-depth investigation into sex effects on mitochondrial hydrogen peroxide (mH 2 O 2 ) generation in hepatic tissue. Female liver mitochondria produce less mH 2 O 2 when oxidizing pyruvate, palmitoyl-carnitine, and succinate when compared to male samples. This difference was attributed to superior coupling between fuel metabolism and oxidative phosphorylation (OxPhos) in female liver mitochondria. Examination of mH 2 O 2 production by individual sites of generation revealed that KGDH was a major source in both male and female liver mitochondria oxidizing pyruvate and malate. Surprisingly, α-keto-β-methyl-n-valeric acid (KMV), a site-specific inhibitor for KGDH, nearly abolished mH 2 O 2 generation in both male and female liver mitochondria oxidizing palmitoyl-carnitine. KMV did not interfere with the fatty acid oxidation (FAO) pathway and was specific to KGDH. KMV inhibited mH 2 O 2 production in liver mitochondria from male and female mice oxidizing myristoyl, octanoyl, and butyryl-carnitine. We also supply evidence that KGDH, not complex I or complex III, is the major mH 2 O 2 generator in liver mitochondria. Together, we discovered KGDH is a major mH 2 O 2 source, regardless of sex and during FAO.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.224
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes2
Has abstractyes

Explore more

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