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Record W4389191922 · doi:10.22215/etd/2023-15834

Enzymatic Regulation of Hepatic Carbohydrate Metabolism in Freeze-tolerant Wood Frogs, Rana sylvatica

2023· dissertation· en· W4389191922 on OpenAlexaff
Anchal Varma

Bibliographic record

Venuenot available
Typedissertation
Languageen
FieldMedicine
TopicAdipose Tissue and Metabolism
Canadian institutionsCarleton University
Fundersnot available
KeywordsPyruvate kinaseGlycolysisDownregulation and upregulationGluconeogenesisBiologyCitric acid cycleBiochemistryCarbohydrate metabolismFructoseAnaerobic glycolysisMetabolismInternal medicine

Abstract

fetched live from OpenAlex

Wood frogs (Rana sylvatica) are a widely researched species, one of just a few vertebrates that can endure natural whole body freezing.These frogs can survive months of sub-zero temperatures during winter, even when 65-70% of their total body water is frozen as extracellular ice.However, this freezing results in cessation of blood circulation, heartbeat, and breathing, leading to limited oxygen supply.Wood frogs must depend on anaerobic glycolysis for energy production during this time.Two of the basic mechanisms underlying freeze tolerance in wood frogs are metabolic rate depression (MRD) and the production of high concentrations of glucose as a cryoprotectant by the liver.This thesis investigates the regulation of key enzymatic checkpoints in hepatic carbohydrate metabolism in wood frogs.The research revealed the downregulation of pyruvate kinase (PK) during freezing, leading to inhibition of glycolysis.The study also shed light on the suppression of fructose-1,6-bisphosphate (FBPase) and citrate synthase (CS), that inhibit flux through gluconeogenesis and the tricarboxylic acid cycle (TCA), respectively.Control of these enzymes likely supports MRD during the severe winter months.Moreover, glycerol-3-phosphate dehydrogenase (G3PDH), an enzyme linking lipid and carbohydrate metabolism, was upregulated despite the hypometabolic conditions of the frozen state.This upregulation of G3PDH activity likely plays a vital role in supporting the metabolic survival strategies of wood frogs.Overall, this thesis uncovered an intricate yet synchronized network of enzymes that support MRD and initiate hepatoprotective mechanisms allowing wood frogs to endure prolonged freezing and maintain cellular homeostasis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.277
Teacher spread0.262 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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