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Abstract A028: Defining immune pathways involved in the depletion of B-cell precursor acute lymphoblastic leukemia-initiating cells following early-life cytomegalovirus (CMV) infection in mice

2023· article· en· W4389227944 on OpenAlexaboutno aff
Ali Farrokhi, Tanmaya Atre, C.M. Marquez, Soren Gantt, Gregor S. D. Reid

Bibliographic record

VenueCancer Immunology Research · 2023
Typearticle
Languageen
FieldMedicine
TopicAcute Lymphoblastic Leukemia research
Canadian institutionsnot available
Fundersnot available
KeywordsImmunologyImmune systemBiologyLeukemiaB cellAntibodyChemokineMedicineCancer researchVirology

Abstract

fetched live from OpenAlex

Abstract Background: B-cell acute lymphoblastic leukemia (B-ALL) is one of the most common forms of childhood cancers. Epidemiological studies have shown contrasting results regarding the role of infections in the risk of leukemia, and there is still no clear explanation for the pro- or anti-leukemia effects. Aim: This study aimed to investigate the influence of cytomegalovirus (CMV) infection on the development of B-ALL and identify the underlying immune mechanisms involved. Materials and Methods: In this study, Eμ-Ret transgenic mice were used as a model for hyperdiploid B-ALL, and luciferase-tagged CMV was used as a common early-life infection. The impact of infection on different subsets of B cells and leukemic initiating cells (LICs) in the bone marrow and spleen of neonatal and adult mice was assessed using multicolor flow cytometry. To gain insights into the mechanisms that impact LICs after infection, we sorted LICs from the splenocytes of infected and non-infected RFP mice seven days after infection, and total RNA sequencing (RNA-seq) was performed for gene expression analysis. We used neutralizing antibodies to evaluate the role of different cytokines/chemokines in mediating LIC depletion in vivo. Results: Significant infection-induced depletion of preleukemic cells occurred in infected neonate Eμ-ret mice on BALBc, BALBc/FVB (F1) and BALBc/C57 (F1) backgrounds. This depletion showed an age-dependent pattern, with only infection in the first week after birth reducing the LICs numbers. Depletion of preleukemia was dependent on Stat4 and p40 homodimer/monomers, but not p40 heterodimers (IL-12 and IL-23). Several chemokines/cytokines, including IFNg and TNFa, showed high levels of expression in the serum of CMV-infected pups but not in adult mice. RNA sequencing indicated that IFNg and TNFa exerted a direct effect on preleukemic cells. In vivo neutralization of IFNg completely blocked the depletion effect of CMV infection. Further experiments confirmed that this cytokine works downstream of the Stat4 signaling pathway. Conclusion: This is the first model to study the impact of CMV infection and the time of its exposure on B-ALL initiating cells. The identified Stat4-, IL12p40 homodimer/monomer-, and IFNg- driven activities could inform future treatment and prevention approaches for B-ALL. Citation Format: Ali Farrokhi, Tanmaya Atre, Citlali Marquez1, Soren Gantt, Gregor Reid. Defining immune pathways involved in the depletion of B-cell precursor acute lymphoblastic leukemia-initiating cells following early-life cytomegalovirus (CMV) infection in mice [abstract]. In: Proceedings of the AACR Special Conference in Cancer Research: Tumor Immunology and Immunotherapy; 2023 Oct 1-4; Toronto, Ontario, Canada. Philadelphia (PA): AACR; Cancer Immunol Res 2023;11(12 Suppl):Abstract nr A028.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.054
GPT teacher head0.339
Teacher spread0.286 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2023
Admission routes1
Has abstractyes

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