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Record W4389258164 · doi:10.1101/2023.11.30.569343

Exploring the Brain Characteristics of Structure-informed Functional Connectivity through Graph Attention Network

2023· preprint· en· W4389258164 on OpenAlexaff
Zifan Wang, Paule-J Toussaint, Alan C. Evans, Xi Jiang

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsMcGill UniversityMontreal Neurological Institute and Hospital
FundersNational Natural Science Foundation of China
KeywordsHuman Connectome ProjectFunctional connectivityNeuroscienceFunctional magnetic resonance imagingConnectomicsPerspective (graphical)ConnectomeHuman brainPsychologyPrefrontal cortexCerebral cortexComputer scienceDiffusion MRIMagnetic resonance imagingArtificial intelligenceCognitionMedicine

Abstract

fetched live from OpenAlex

Abstract Independent brain regions in neuroanatomy achieve a specific function through connections. As one of the significant morphological features of the cerebral cortex, previous studies have found significant differences in the structure and function of the cerebral gyri and sulci, which provides a basis for us to study the functional connectivity differences between these two anatomic parts. Previous studies using fully connected functional connectivity (FC) and structural connectivity (SC) matrices found significant differences in the perspective of region or connection in gyri and sulci. However, a clear issue is that previous studies have only analyzed the differences through either FC or SC, without effectively integrating both. Meanwhile, another nonnegligible issue is that the subcortical areas, involved in various tasks, have not been systematically explored with cortical regions. Due to the strong coupling between FC and SC, we use SC-informed FC to systematically explore the functional characteristics of gyri/sulci and subcortical regions by combining deep learning method with magnetic resonance imaging (MRI) technology. Specifically, we use graph attention network (GAT) to explore the important connections in the SC-informed FC through the Human Connectome Project (HCP) dataset. With high classification results of above 99%, we have successfully discovered important connections under different tasks. We have successfully explored the importance of different types of connections. In low threshold, gyri-gyri are the most important connections. With the threshold increasing, sub-sub become the most important. Gyri have a higher importance in functional connectivity than sulci. In the seven task states, these connections are mainly distributed among the front, subcortical, and occipital. This study provides a novel way to explore the characteristics of functional connectivity at the whole brain scale.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.015
Threshold uncertainty score0.030

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.092
GPT teacher head0.255
Teacher spread0.162 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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