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Record W4389342711 · doi:10.1101/2023.12.04.23299259

Evaluation of minimum-to-severe global and macrovesicular steatosis in human liver specimens: a portable ambient light-compatible spectroscopic probe

2023· preprint· en· W4389342711 on OpenAlexafffund
Hao Guo, Ashley Stueck, Jason B. Doppenberg, Yun Suk Chae, Alexey B. Tikhomirov, Haishan Zeng, Marten A. Engelse, Boris Gala-López, Anita Mahadevan‐Jansen, Ian P.J. Alwayn, Andrea K. Locke, K. C. Hewitt

Bibliographic record

VenuemedRxiv · 2023
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSpectroscopy Techniques in Biomedical and Chemical Research
Canadian institutionsBC Cancer AgencyNova Scotia Health AuthorityDalhousie University
FundersResearch Nova ScotiaDalhousie University
KeywordsRaman spectroscopySteatosisReflectivityComputer scienceMaterials scienceMedicineInternal medicineOpticsPhysics

Abstract

fetched live from OpenAlex

Background & Aims Hepatic steatosis (HS), particularly macrovesicular steatosis (MaS), influences transplant outcomes. Accurate assessment of MaS is crucial for graft selection. While traditional assessment methods have limitations, non-invasive spectroscopic techniques like Raman and reflectance spectroscopy offer promise. This study aimed to evaluate the efficacy of a portable ambient light-compatible spectroscopic system in assessing global HS and MaS in human liver specimens. Methods A two-stage approach was employed on thawed snap-frozen human liver specimens under ambient room light: biochemical validation involving a comparison of fat content from Raman and reflectance intensities with triglyceride (TG) quantifications and histopathological validation, contrasting Raman-derived fat content with evaluations by an expert pathologist and an artificial intelligence (AI) algorithm. Raman and reflectance intensities were combined to discern significant (≥10%) discrepancies in global HS and MaS. Results The initial set of 16 specimens showed a positive correlation between Raman and reflectance-derived fat content and TG quantifications. The Raman system effectively differentiated minimum-to-severe global and macrovesicular steatosis in the subsequent 66 specimens. A dual-variable prediction algorithm, was developed, effectively classifying significant discrepancies (>10%) between AI-estimated global HS and pathologist-estimated MaS. Conclusion Our study established the viability and reliability of a portable spectroscopic system for non-invasive HS and MaS assessment in human liver specimens. The compatibility with ambient light conditions and the ability to address limitations of previous methods marks a significant advancement in this field. By offering promising differentiation between global HS and MaS, our system introduces an innovative approach to real-time and quantitative donor HS assessments. The proposed method holds promise of refining donor liver assessment during liver recovery and ultimately elevating transplantation outcomes. Lay Summary This research explored a portable ambient light-compatible spectroscopic probe to non-invasively assess global and macrovesicular steatosis in human liver specimens. Our findings suggest that this method can be a reliable tool to aid surgeons’ decision-making on a liver’s suitability for transplantation. Graphic Abstract Highlights We introduced a portable ambient light-compatible spectroscopic probe which could non-invasively analyze Raman scattering and reflectance of human liver specimens. Both biochemical and histopathological approaches were applied to validate the spectroscopic probe. Histopathological evaluation covered minimum-to-severe global and macrovesicular steatosis, surpassing previous spectroscopic studies. A dual-variable prediction for precise differentiation between global and macrovesicular steatosis offers the potential for enhanced, real-time, and quantitative liver assessments in clinical settings.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.355
Teacher spread0.318 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2023
Admission routes2
Has abstractyes

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