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CNN-based retrieval of x-ray phase-contrast images from experimental data

2023· article· en· W4389667741 on OpenAlexaff
Serena Qinyun Z. Shi, Abdollah Pil-Ali, Sebastian Meyer, K. S. Karim, Peter B. Noël

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldPhysics and Astronomy
TopicAdvanced X-ray Imaging Techniques
Canadian institutionsUniversity of Waterloo
FundersHORIZON EUROPE HealthNational Science Foundation
KeywordsSpeckle patternComputer scienceArtificial intelligenceRobustness (evolution)Computer visionConvolutional neural networkSpeckle noisePhase retrievalContrast (vision)Coherence (philosophical gambling strategy)Phase-contrast imagingOpticsPhase contrast microscopyFourier transformMathematicsPhysics

Abstract

fetched live from OpenAlex

Speckle-based x-ray phase-contrast imaging (XPCI) offers enhanced sensitivity towards weakly-attenuating materials – such as human tissue – and overcomes limitations of typical phase-contrast imaging systems due to less stringent requirements for setup geometry, coherence, and propagation distances. However, obtaining high-quality phase-contrast images requires accurate tracking of the near-field speckles generated by a random diffuser. A recently proposed speckle tracking method, convolutional-neural-network-based analysis (CADE), offers superior tracking performance, reduced computational times, and robustness to noise when compared to previous state-of-the-art methods but has only been validated on simulated displacements. In this study, we validated CADE on a simulated sine wave sample and experimental XPCI images of a plastic ball. CADE achieved good accuracy in displacement estimation with a simulated sample and further successfully extracted phase contrast signals from experimental imaging data. This brings the implementation of CADE in XPCI one step closer, broadening the potential of XPCI by introducing a novel, improved speckle tracking method.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.007
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.361
Teacher spread0.321 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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