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Record W4389787921 · doi:10.1080/07060661.2023.2290039

Artificial intelligence analysis of contributive factors in determining blackleg disease severity in canola farmlands

2023· article· en· W4389787921 on OpenAlex
Liang Zhao, Michael W. Harding, Gary Peng, R. M. Lange, Sean Walkowiak, W. G. Dilantha Fernando

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.
venuePublished in a venue whose home country is Canada.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenueCanadian Journal of Plant Pathology · 2023
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicInsect Pest Control Strategies
Canadian institutionsAgriculture and Agri-Food CanadaAgriculture Food and Rural DevelopmentUniversity of Manitoba
FundersAlberta Canola Producers CommissionGovernment of CanadaSaskatchewan Canola Development Commission
KeywordsBlacklegLeptosphaeria maculansCanolaPredictive modellingAgricultureMachine learningPlant diseaseBiologyArtificial intelligenceComputer scienceBiotechnologyBrassicaEcologyAgronomy

Abstract

fetched live from OpenAlex

Canola (Brassica napus L.) production is threatened by blackleg disease caused by Leptosphaeria maculans.Disease outcome is determined by interactions among pathogens, plants, farming practices, and environmental factors.Although the gene-for-gene interactions between the pathogen and its plant host are relatively clear, how precisely the pathogen interacts with the environment and farming practices is still poorly understood, making disease forecasting challenging for commercial farmlands.In recent years, artificial intelligence (AI) has been successful in forecasting disease risks based on environmental factors.In this study, we evaluated two AI methods and a data augmentation method to forecast disease risk using a dataset collected from 116 farmlands in Alberta in 2021 and 2022.We first assessed a machine learning model (support vector machine or SVM) and a deep-learning model (convolutional neural network or CNN) to predict blackleg severity based on five weather variables, flea beetle damage, root maggot damage, and crop-rotation variables.Both SVM and CNN predicted the disease risk with an accuracy of over 66%.The data augmentation method did not improve model performance.Flea beetle feeding and maggot damage contribute little to the model's performance, and omitting these data did not appear to affect the results.In contrast, crop rotation contributes substantially to model performance.The five weather variables contribute roughly equally to the model's performance, and removing any of the individual weather variables did not impact prediction ability for both models.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.708
Threshold uncertainty score0.995

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.033
GPT teacher head0.238
Teacher spread0.205 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it