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Visualization of Glioblastoma with Infrared-Labeled Aptamers for Fluorescent Guided Surgery

2023· preprint· en· W4389861150 on OpenAlexaff
Galina S. Zamay, Anastasia A. Koshmanova, А. А. Народов, Anton K. Gorbushin, Ivan I. Voronkovskiy, Daniil S. Grek, Natalia A. Luzan, Elena D. Nikolaeva, Olga S. Kolovskaya, Irina A. Shchugoreva, Polina V. Artyushenko, Yury E. Glazyrin, Victoriya D. Fedotovskaya, Dmitrii V. Veprintcev, Кirill V. Belugin, Kirill A. Lukyanenko, А. К. Кириченко, И. Н. Лапин, Vladimir А. Khorzhevskii, Evgeny V. Semichev, Alexey A. Mohov, Daria A. Kirichenko, Nikolay А. Tokarev, N. G. Chanchikova, Alexey V. Krat, Р. А. Зуков, В. И. Бахтина, P. G. Shnyakin, P. А. Shesternya, Felix N. Tomilin, A. A. Kosinova, В. А. Светличный, Tatiana N. Zamay, Vasily S. Mezko, Maxim V. Berezovski, Anna S. Kichkailo

Bibliographic record

VenuePreprints.org · 2023
Typepreprint
Languageen
FieldEngineering
TopicNanoplatforms for cancer theranostics
Canadian institutionsUniversity of Ottawa
Fundersnot available
KeywordsAptamerGlioblastomaVisualizationBrain tumorIn vivoBiomedical engineeringMolecular imagingFluorescence microscopePathologyComputer scienceMedicineFluorescenceBiologyCancer researchArtificial intelligence

Abstract

fetched live from OpenAlex

Background: Glioblastoma remains a challenging brain tumor to treat due to its infiltrative nature. Accurately identifying tumor boundaries during surgery is crucial for successful tumor resection. This study introduces an innovative intraoperative visualization method utilizing a surgical fluorescence microscope to precisely locate tumor cells. The focus of the study is on IR-Glint, a novel preparation comprising Cy7.5-labeled aptamers Gli-233nt and Gli-55_3L specific to human glioblastoma. Methods: The aptamers were modified using molecular modeling and quantum chemical techniques. The effectiveness of the preparation was assessed using flow cytometry and microscopy on primary cultures of human glioblastoma. In vivo studies were conducted on mouse and rabbit models, employing orthotopic xenotransplantation of human brain glioblastoma with various imaging techniques, including PET/CT, in vivo fluorescence visualization, confocal laser scanning, and surgical microscopy. Results: The experiments validated the potential of IR-Glint for intraoperative visualization of glioblastoma using infrared imaging. Surface application of the aptamer-based formulation on the brain allowed clear visualization of the tumor, aiding surgeons in tumor resection. This approach also reduces the dosage required and mitigates potential toxic effects on the patient. Conclusions: This study demonstrates the promising potential of using in-frared dye-labeled aptamers for intraoperative visualization of glioblastoma. By improving surgical treatment outcomes in neurosurgery, this novel approach may pave the way for future advancements in the field.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.100
GPT teacher head0.321
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2023
Admission routes1
Has abstractyes

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