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Record W4389887343 · doi:10.36939/ir.202312181457

Exploring Hyperspectral Imaging and 3D Convolutional Neural Network for Stress Classification in Plants

2023· dissertation· en· W4389887343 on OpenAlexafffund
Nooshin Noshiri

Bibliographic record

Venuenot available
Typedissertation
Languageen
FieldChemistry
TopicSpectroscopy and Chemometric Analyses
Canadian institutionsUniversity of WinnipegUniversity of Manitoba
FundersMitacs
KeywordsHyperspectral imagingConvolutional neural networkMultispectral imageArtificial intelligenceComputer sciencePattern recognition (psychology)PixelFocus (optics)Process (computing)RGB color modelRemote sensingComputer visionGeography

Abstract

fetched live from OpenAlex

Hyperspectral imaging (HSI) has emerged as a transformative technology in imaging, characterized by its ability to capture a wide spectrum of light, including wavelengths beyond the visible range. This approach significantly differs from traditional imaging methods such as RGB imaging, which uses three color channels, and multispectral imaging, which captures several discrete spectral bands. Through this approach, HSI offers detailed spectral signatures for each pixel, facilitating a more nuanced analysis of the imaged subjects. This capability is particularly beneficial in applications like agricultural practices, where it can detect changes in physiological and structural characteristics of crops. Moreover, the ability of HSI to monitor these changes over time is advantageous for observing how subjects respond to different environmental conditions or treatments. However, the high-dimensional nature of hyperspectral data presents challenges in data processing and feature extraction. Traditional machine learning algorithms often struggle to handle such complexity. This is where 3D Convolutional Neural Networks (CNNs) become valuable. Unlike 1D-CNNs, which extract features from spectral dimensions, and 2D-CNNs, which focus on spatial dimensions, 3D CNNs have the capability to process data across both spectral and spatial dimensions. This makes them adept at extracting complex features from hyperspectral data. In this thesis, we explored the potency of HSI combined with 3D-CNN in agriculture domain where plant health and vitality are paramount. To evaluate this, we subjected lettuce plants to varying stress levels to assess the performance of this method in classifying the stressed lettuce at the early stages of growth into their respective stress-level groups. For this study, we created a dataset comprising 88 hyperspectral image samples of stressed lettuce. Utilizing Bayesian optimization, we developed 350 distinct 3D-CNN models to assess the method. The top-performing model achieved a 75.00\% test accuracy. Additionally, we addressed the challenge of generating valid 3D-CNN models in the Keras Tuner library through meticulous hyperparameter configuration. Our investigation also extends to the role of individual channels and channel groups within the color and near-infrared spectrum in predicting results for each stress-level group. We observed that the red and green spectra have a higher influence on the prediction results. Furthermore, we conducted a comprehensive review of 3D-CNN-based classification techniques for diseased and defective crops using non-UAV-based hyperspectral images.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.009
Threshold uncertainty score0.017

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.094
GPT teacher head0.320
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes2
Has abstractyes

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