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Record W4390700096 · doi:10.1101/2024.01.03.24300797

Artificial Intelligence (AI) Based Prediction of Mortality, ICU Admission and Ventilation Support Requirement for COVID-19 Patients Using 122 Clinical and Demographic Parameters

2024· preprint· en· W4390700096 on OpenAlexaff
Mahbubunnabi Tamal, Mohammad Marufur Rahman, Maryam Alhasim, Mobarak Al Mulhim, Mohamed Deriche

Bibliographic record

VenuemedRxiv · 2024
Typepreprint
Languageen
FieldMedicine
TopicCOVID-19 diagnosis using AI
Canadian institutionsArtificial Intelligence in Medicine (Canada)Innovation Cluster (Canada)
Fundersnot available
KeywordsSupport vector machineRandom forestArtificial intelligenceNaive Bayes classifierComputer scienceReceiver operating characteristicUndersamplingBootstrapping (finance)Machine learningArtificial neural networkFeature selectionLogistic regressionCross-validationIntensive careLinear discriminant analysisData miningStatisticsMedicineMathematicsIntensive care medicineEconometrics

Abstract

fetched live from OpenAlex

ABSTRACT Introduction COVID-19 can rapidly lead to severe respiratory problems and can result in an overwhelming burden on healthcare systems worldwide, making it imperative to identify high-risk patients and predict survival and need for intensive care (ICU). Most of the proposed modes are not well reported making them less reproducible and prone to high risk of bias. Methods In this study, the performances of seven classical machine (Random Forest (RF), Logistic Regression (LR), Support Vector Machine (SVM), k-Nearest Neighbor (KNN), XGBoost, Linear Discriminant Analysis (LDA) and Gaussian Naïve Bayes (NB)) and two deep leaning models (Deep Neural Network (DNN) and Long Short-Term Memory (LSTM)) in combination with two widely used feature selection methods (random forest and extra tree classifier) were investigated to predict “last status” representing mortality, “ICU requirement”, and “ventilation days”. Fivefold cross-validation was used for training and validation purposes. In each fold, 80% data were used for training the models and the rest 20% were preserved for validation. To minimize bias, the training and testing sets were split maintaining similar distributions. Before splitting, k-nearest neighbour (KNN) imputation algorithm was employed to resolve the issue of missing data. On the other hand, bootstrapping technique was used for both oversampling and undersampling to address the issue of data imbalance. Publicly available 122 demographic and clinical features of 1384 patients were used. The performances of the models were evaluated using accuracy, sensitivity, specificity, and AUC (Area Under the Curve) of Receiver operating characteristic curves (ROC). Results Only 10 features out of 122 were found to be useful in prediction modelling with “Acute kidney injury during hospitalization” feature being the most important one. Blood pH presents a decent discrimination capability especially in predicting “ICU requirement”, and “ventilated days”, Whereas gender and age are found to be vital in predicting “last status”. It was observed that selecting more than 10 features lower the prediction accuracy. The performances of different algorithms depend on number of features and data pre-processing techniques. LSTM with the with balanced data and 10 features performs the best in predicting “last status” as well as “ICU requirement” with an average of 90%, 92%, 86% and 95% accuracy, sensitivity, specificity, and AUC respectively. DNN performs the best in predicting “Ventilation days” with 88% accuracy. For “ICU requirement” which is a binary prediction task, data pre-processing technique does not have any influence in making prediction and performances of different methods are comparable (89%, 98%, 78% and 95% accuracy, sensitivity, specificity, and AUC respectively). However, the number of features selected vary with data pre-processing technique. Conclusion Considering all the factors and limitations including absence of exact time point of clinical onset, LSTM with carefully selected features can accurately predict “last status” and “ICU requirement” with approximately 90% accuracy, sensitivity, and specificity. DNN performs the best in predicting “Ventilation days”. Appropriate machine learning algorithm with carefully selected features and balance data can accurately predict mortality, ICU requirement and ventilation support. Such model can be very useful in emergency and pandemic where prompt and precise decision making is crucial.

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How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.003
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.335
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.249
GPT teacher head0.457
Teacher spread0.208 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations3
Published2024
Admission routes1
Has abstractyes

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