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Record W4390744292 · doi:10.1111/apha.14078

Branchial <scp>CO<sub>2</sub></scp> and ammonia excretion in crustaceans: Involvement of an apical Rhesus‐like glycoprotein

2024· article· en· W4390744292 on OpenAlexafffund
Alex R. Quijada‐Rodriguez, Sandra Fehsenfeld, Anna‐Maria Marini, Jonathan M. Wilson, Mikyla T. Nash, Maria Sachs, David W. Towle, Dirk Weihrauch

Bibliographic record

VenueActa Physiologica · 2024
Typearticle
Languageen
FieldEnvironmental Science
TopicCrustacean biology and ecology
Canadian institutionsUniversité du Québec à RimouskiWilfrid Laurier UniversityUniversity of Manitoba
FundersNatural Sciences and Engineering Research Council of CanadaFédération Wallonie-Bruxelles
KeywordsCrustaceanGlycoproteinExcretionAmmoniaBiologyChemistryBiochemistryZoologyInternal medicineCell biologyMedicine

Abstract

fetched live from OpenAlex

Abstract Aim To determine whether the crustacean Rh1 protein functions as a dual CO 2 /ammonia transporter and investigate its role in branchial ammonia excretion and acid–base regulation. Methods Sequence analysis of decapod Rh1 proteins was used to determine the conservation of amino acid residues putatively involved in ammonia transport and CO 2 binding in human and bacterial Rh proteins. Using the Carcinus maenas Rh1 protein (CmRh1) as a representative of decapod Rh1 proteins, we test the ammonia and CO 2 transport capabilities of CmRh1 through heterologous expression in yeast and Xenopus oocytes coupled with site‐directed mutagenesis. Quantitative PCR was used to assess the distribution of CmRh1 mRNA in various tissues. Western blotting was used to assess CmRh1 protein expression changes in response to high environmental ammonia and CO 2 . Further, immunohistochemistry was used to assess sub‐cellular localization of CmRh1 and a membrane‐bound carbonic anhydrase (CmCAg). Results Sequence analysis of decapod Rh proteins revealed high conservation of several amino acid residues putatively involved in conducting ammonia transport and CO 2 binding. Expression of CmRh1 in Xenopus oocytes enhanced both ammonia and CO 2 transport which was nullified in CmRh1 D180N mutant oocytes. Transport of the ammonia analog methylamine by CmRh1 is dependent on both ionized and un‐ionized ammonia/methylamine species. CmRh1 was co‐localized with CmCAg to the apical membrane of the crustacean gill and only experienced decreased protein expression in the anterior gills when exposed to high environmental ammonia. Conclusion CmRh1 is the first identified apical transporter‐mediated route for ammonia and CO 2 excretion in the crustacean gill. Our findings shed further light on the potential universality of dual ammonia and CO 2 transport capacity of Rhesus glycoproteins in both vertebrates and invertebrates.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.881
Threshold uncertainty score0.683

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.230
Teacher spread0.219 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2024
Admission routes2
Has abstractyes

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