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Record W4391338852 · doi:10.7554/elife.92450.1

Targeting the Hippo pathway in cancers via ubiquitination dependent TEAD degradation

2024· preprint· en· W4391338852 on OpenAlexaff
Trang H. Pham, Kanika Bajaj Pahuja, Thijs J. Hagenbeek, Cameron L. Noland, Victoria C. Pham, Xiaosai Yao, Christopher M. Rose, Kristen Browder, Ho-June Lee, Mamie Yu, May Liang-Chu, Scott E. Martin, Erik Verschueren, Jason Li, Marta H. Kubala, Rina Fong, Maria Lorenzo, Paul Beroza, Peter Hsu, Sayantanee Paul, Elisia Villemure, Wendy Lee, Tommy K. Cheung, Saundra Clausen, Jennifer A. Lacap, Yuxin Liang, Jason Cheng, Steve Schmidt, Zora Modrušan, Michael S. Cohen, James J. Crawford, Heinrich Jasper, Alan Ashworth, Jennie R. Lill, Shiva Malek, Joachim Rudolph, Ingrid E. Wertz, Matthew T. Chang, Xin Ye, Anwesha Dey

Bibliographic record

VenueeLife · 2024
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicHippo pathway signaling and YAP/TAZ
Canadian institutionsMicrosemi (Canada)
Fundersnot available
KeywordsUbiquitinHippo signaling pathwayDegradation (telecommunications)Cancer researchCell biologyChemistryBiologySignal transductionGeneticsComputer scienceGene

Abstract

fetched live from OpenAlex

Abstract The Hippo pathway is among the most frequently altered key signaling pathways in cancer. TEAD1-4 are essential transcription factors and key downstream effectors in the Hippo pathway. Here we identified RNF146 as a ubiquitin ligase (E3) that can catalyze TEAD ubiquitination and negatively regulate their function in cells. We show that this ubiquitin of TEADs is governed by their PARylation state and validated the genetic interaction between RNF146 and the Hippo pathway in cancer cell lines and the model organism Drosophila melanogaster. Furthermore, we demonstrate that pharmacologically induced ubiquitination of TEADs by heterobifunctional chemical inducers of protein degradation (CIDE) molecules can promote potent pan-TEAD degradation. These TEAD-CIDEs can effectively suppress activation of TEAD target genes in a dose-dependent manner and exhibited significant anti-proliferative effects in Hippo-dependent tumor cells, thus phenocopy the effect of genetic ablation of TEAD protein. Collectively, this study demonstrates a post-translational mechanism of TEAD protein regulation and provides a proof-of-concept demonstration that pharmacological induced TEAD ubiquitination could be an effective therapeutic strategy to target Hippo-driven cancers.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.259
Teacher spread0.245 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes1
Has abstractyes

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