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Record W4391743207 · doi:10.1038/s41597-023-02832-6

The bii4africa dataset of faunal and floral population intactness estimates across Africa’s major land uses

2024· article· en· W4391743207 on OpenAlexaff
Hayley S. Clements, Emmanuel Do Linh San, Gareth P. Hempson, Birthe Linden, Bryan Maritz, Ara Monadjem, Chevonne Reynolds, Frances Siebert, Nicola Stevens, Reinette Biggs, Alta De Vos, Ryan Blanchard, Matthew F. Child, Karen J. Esler, Maike Hamann, Ty Loft, Belinda Reyers, Odirilwe Selomane, Andrew Skowno, Tshegofatso Tshoke, Diarrassouba Abdoulaye, Thierry Aebischer, Jesús Aguirre‐Gutiérrez, Graham J. Alexander, Abdullahi H. Ali, David G. Allan, Esther Ekua Amoako, Samuel Angedakin, Edward Aruna, Nico L. Avenant, Gabriel Badjedjea, Adama Bakayoko, Abraham Bamba-kaya, Michael F. Bates, Paul J. J. Bates, Steven R. Belmain, Emily Bennitt, J. Chester Bradley, Chris A. Brewster, Michael B. Brown, Michelle Brown, Josef Bryja, Thomas M. Butynski, Filipe Carvalho, Alan Channing, Colin A. Chapman, Callan Cohen, Marina Cords, Jennifer Danzy Cramer, Nadine Elizabeth Cronk, Pamela M. K. Cunneyworth, Fredrik Dalerum, Emmanuel Danquah, Harriet T. Davies‐Mostert, Andrew D. de Blocq, Yvonne A. de Jong, Terrence C. Demos, Christiane Denys, Chabi A. M. S. Djagoun, Thomas M. Doherty‐Bone, Marine Drouilly, Du Toit, David A. Ehlers Smith, Yvette C. Ehlers Smith, Seth J. Eiseb, Peter J. Fashing, Adam W. Ferguson, José María Fernández-García, Manfred Finckh, Claude Fischer, Edson Gandiwa, Philippe Gaubert, Jérôme Y. Gaugris, Dalton J. Gibbs, Jason Gilchrist, José María Gil‐Sánchez, Anthony Githitho, Peter Goodman, Laurent Granjon, J. Paul Grobler, Bonginkosi C. Gumbi, Václav Gvoždík, James T. Harvey, Morgan Hauptfleisch, Firas Hayder, Emmanuel M. Hema, Marna Herbst, Mariano Houngbédji, Brian Huntley, Rainer Hutterer, Samuel T. Ivande, Kate Jackson, Gregory F. M. Jongsma, Javier Juste, Blaise Kadjo, Prince Kaleme, Edwin Kamugisha, Beth A. Kaplin, Humphrey N. Kato, Christian Kiffner, Duncan M. Kimuyu, Robert Kityo, N. Kouamé, Marcel T. Kouete, Aliza le Roux, Alan TK Lee, Mervyn Lötter, Anne Mette Lykke, Duncan N. MacFadyen, Gacheru P. Macharia, Zimkitha J.K. Madikiza, Themb’alilahlwa A. M. Mahlaba, David Mallon, Mnqobi L. Mamba, Claude Mande, Rob Marchant, Robin Maritz, Wanda Markotter, Trevor McIntyre, John Measey, Addisu Mekonnen, Paulina Meller, Haemish Melville, Kevin Z. Mganga, Michael G. L. Mills, Liaan Minnie, Alain Didier Missoup, Abubakr Mohammad, Nancy N. Moinde, Eric Moïse Bakwo Fils, Pedro Monterroso, Jennifer F. Moore, Simon Musila, Sedjro Gilles Armel Nago, Maganizo W. Namoto, Fatimata Niang, Violaine Nicolas, Jerry B. Nkenku, Evans E. Nkrumah, Gonwouo L. Nono, Mulavwa M. Norbert, Katarzyna Nowak, Benneth C. Obitte, Arnold D. Okoni-Williams, Jonathan Onongo, M. Justin O’Riain, Samuel Temidayo Osinubi, Daniel M. Parker, Francesca Parrini, Mike Peel, Johannes Penner, Darren W. Pietersen, Andrew J. Plumptre, D. Ponsonby, Stefan Porembski, R. John Power, Frans G.T. Radloff, R.V. Rambau, Tharmalingam Ramesh, Leigh R. Richards, Mark‐Oliver Rödel, Dominic P. Rollinson, Francesco Rovero, Mostafa A. Saleh, Ute Schmiedel, M. Corrie Schoeman, Paul Scholte, Thomas L. Serfass, Julie Teresa Shapiro, Sidney Shema, Stefan J. Siebert, Jasper A. Slingsby, Alexander Sliwa, Hanneline Smit‐Robinson, Etotépé A. Sogbohossou, Michael J. Somers, Stephen Spawls, Jarryd P. Streicher, Lourens H. Swanepoel, Iroro Tanshi, Peter J. Taylor, William A. Taylor, Mariska te Beest, Paul T. Telfer, Dave I. Thompson, Elie Tobi, Krystal A. Tolley, Andrew A. Turner, Wayne Twine, Victor Van Cakenberghe, Frederik Van de Perre, Helga van der Merwe, Chris J.G. van Niekerk, Pieter van Wyk, Jan A. Venter, Luke Verbürgt, Géraldine Veron, Susanne Vetter, Maria S. Vorontsova, Thomas C. Wagner, Paul W. Webala, Natalie Weber, Sina M. Weier, Paula A. White, Melissa A. Whitecross, Benjamin J. Wigley, Frank Willems, Christiaan W. Winterbach, Galena M. Woodhouse

Bibliographic record

VenueScientific Data · 2024
Typearticle
Languageen
FieldEnvironmental Science
TopicEcology and Vegetation Dynamics Studies
Canadian institutionsUniversity of CalgaryVancouver Island University
FundersNatural Environment Research CouncilSight Research UK
KeywordsGeographyPopulationEcologyBiologyDemographySociology

Abstract

fetched live from OpenAlex

Sub-Saharan Africa is under-represented in global biodiversity datasets, particularly regarding the impact of land use on species' population abundances. Drawing on recent advances in expert elicitation to ensure data consistency, 200 experts were convened using a modified-Delphi process to estimate 'intactness scores': the remaining proportion of an 'intact' reference population of a species group in a particular land use, on a scale from 0 (no remaining individuals) to 1 (same abundance as the reference) and, in rare cases, to 2 (populations that thrive in human-modified landscapes). The resulting bii4africa dataset contains intactness scores representing terrestrial vertebrates (tetrapods: ±5,400 amphibians, reptiles, birds, mammals) and vascular plants (±45,000 forbs, graminoids, trees, shrubs) in sub-Saharan Africa across the region's major land uses (urban, cropland, rangeland, plantation, protected, etc.) and intensities (e.g., large-scale vs smallholder cropland). This dataset was co-produced as part of the Biodiversity Intactness Index for Africa Project. Additional uses include assessing ecosystem condition; rectifying geographic/taxonomic biases in global biodiversity indicators and maps; and informing the Red List of Ecosystems.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.149
Threshold uncertainty score0.526

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0000.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.036
GPT teacher head0.317
Teacher spread0.281 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations17
Published2024
Admission routes1
Has abstractyes

Explore more

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