Reply to: Field experiments show no consistent reductions in soil microbial carbon in response to warming
Bibliographic record
Abstract
The dynamics of soil microbial carbon are complex and critically important for global carbon cycles. In our previous study 1 , we presented global trends in soil microbial carbon across time and assessed the main drivers of microbial carbon change. In the accompanying Comment, Yue et al. 2 were able to replicate our analysis, and confirmed the robustness of a decreasing trend in soil microbial carbon using bootstrapping. However, contrary to our findings, Yue et al. argue that microbial carbon decreases are likely not caused by changes in temperature, as they found no support for this relationship in warming experiments and temporal datasets. While we appreciate the additional analyses undertaken by Yue et al. 2 , we have concerns with their approach and respond to their Comment.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.005 | 0.027 |
| Meta-epidemiology (narrow) | 0.001 | 0.001 |
| Meta-epidemiology (broad) | 0.001 | 0.001 |
| Bibliometrics | 0.001 | 0.001 |
| Science and technology studies | 0.003 | 0.004 |
| Scholarly communication | 0.002 | 0.003 |
| Open science | 0.002 | 0.002 |
| Research integrity | 0.038 | 0.044 |
| Insufficient payload (model declined to judge) | 0.005 | 0.012 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".