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Record W4392350096 · doi:10.18280/ts.410142

Enhanced Karyotyping Through Deep Learning-Assisted Segmentation and Classification of Chromosomal Cells

2024· article· en· W4392350096 on OpenAlexvenueno aff
Saranya Sekar, Lakshmi Sankaran

Bibliographic record

VenueTraitement du signal · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomic variations and chromosomal abnormalities
Canadian institutionsnot available
Fundersnot available
KeywordsKaryotypeArtificial intelligenceSegmentationComputer scienceDeep learningComputational biologyPattern recognition (psychology)BiologyChromosomeGeneticsGene

Abstract

fetched live from OpenAlex

The escalating prevalence of genetic disorders in humans underscores the criticality of early detection.Current clinical methodologies, such as cellular activity assessment and chromosomal examination, are widely employed for early-stage prediction of these disorders.However, traditional approaches to chromosomal cell (CC) examination are intricate and labor-intensive.This study proposes a novel deep learning framework (DLF) to overcome these challenges by precisely and efficiently segmenting and classifying CCs.As part of this scheme, images are collected and resized, the DLF is trained using the selected images, segmentation and deep feature extraction of the CC are performed.The proposed methodology involves image collection and resizing, training the DLF with chosen images, CC segmentation and feature extraction and multiclass classification and performance verification.This work implements the VGG-UNet plan to examine the chosen CC images collected from the Biomedical Imaging Laboratory (BioImLab).An experimental inquiry is being carried out on 5474 images and the achieved findings are addressed.The findings of this research suggest that the presented work help to provide a detection accuracy of >98% with the K-Nearest Neighbor supported classifier.This research can be expanded in the future to detect the genetic disorder based on the information obtained from the CC.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.238
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2024
Admission routes1
Has abstractyes

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