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Record W4392371850 · doi:10.1007/s44281-024-00028-5

Lipid metabolism and MAPK-ICE1 cascade play crucial roles in cold tolerance of banana

2024· article· en· W4392371850 on OpenAlexaff
Shuofan Wu, Chunhua Hu, Sheng Zhang, Guiming Deng, Ou Sheng, Tongxin Dou, Fangcheng Bi, Weidi He, Tao Dong, Chunyu Li, Siwen Liu, Huijun Gao, Zhen Yao, Qiaosong Yang

Bibliographic record

VenueHorticulture Advances · 2024
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicBanana Cultivation and Research
Canadian institutionsMinistry of Agriculture
FundersGuangzhou Science and Technology Innovation CenterNational Key Research and Development Program of ChinaDepartment of Agriculture of Guangdong ProvinceNational Natural Science Foundation of China
KeywordsCascadeLipid metabolismMetabolismMAPK/ERK pathwayMAPK cascadeCold toleranceChemistryCell biologyBiochemistryBiologySignal transductionBotany

Abstract

fetched live from OpenAlex

Abstract Low temperature is a major environmental factor that limits the growth, yield, and geographical distribution of Cavendish and Dajiao bananas ( Musa spp.). Dajiao bananas exhibit a significantly higher cold tolerance than the Cavendish cultivar. However, the underlying mechanisms involved in cold tolerance regulation in Dajiao plants have not been determined. In this study, we investigated the mechanisms underlying the differences in cold tolerance at the cellular level between the cold-sensitive Cavendish and cold-tolerant Dajiao banana types through comparative metabolomics and transcriptomics analyses in calli exposed to cold treatment under dark conditions. A higher accumulation of lipids was observed in Dajiao calli cells compared to Cavendish cells under cold stress. After cold treatment, 4,626 and 5,516 differentially expressed genes (DEGs) were identified in Cavendish and Dajiao banana cells, respectively. By integrating the transcriptomic and metabolomic datasets, we discovered that the linoleic acid and α-linoleic acid metabolism and the Abscisic acid (ABA)-independent Mitogen-activated protein kinase (MAPK) cascade-Inducer of CBF expression 1 (ICE1) signal transduction pathway (including Mitogen-activated protein kinase kinase kinase 1 [ MEKK1 ], MAPK5 , ICE1 , and Cold-regulated 47 [ COR47 ]) played crucial roles in the cold tolerance of Dajiao bananas. Our study provides new insights into cold response regulation and novel cold tolerance mechanisms, providing valuable leads and targets for the genetic improvement of cold tolerance in bananas.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.698
Threshold uncertainty score0.220

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.255
Teacher spread0.244 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2024
Admission routes1
Has abstractyes

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