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Record W4392749672 · doi:10.1002/ajmg.a.63590

Next generation sequencing reveals novel compound heterozygous deletions in <i>NDUFAF2</i> in a child with mitochondrial complex I deficiency, nuclear type 10

2024· article· en· W4392749672 on OpenAlexafffund
Aren E. Marshall, Lauren Brady, Ed Yeh, Alan J. Mears, Melanie Lacaria, Pranesh Chakraborty, Mark A. Tarnopolsky, Kristin D. Kernohan

Bibliographic record

VenueAmerican Journal of Medical Genetics Part A · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMitochondrial Function and Pathology
Canadian institutionsMcMaster UniversityHealth Sciences CentreChildren's Hospital of Eastern OntarioNewborn Screening OntarioHamilton Health SciencesUniversity of Ottawa
FundersCanadian Institutes of Health ResearchEuropean Bioinformatics InstituteWellcome Trust
KeywordsConfidentialityIntellectual propertySubject (documents)Patient confidentialityMitochondrial DNAGeneticsInstitutionDNA sequencingPatient dataGenetic testingBiologyComputational biologyInternet privacyMedicineComputer scienceWorld Wide WebComputer securityGenePolitical scienceLaw

Abstract

fetched live from OpenAlex

Patient-related data, including genetic sequencing data not included in the manuscript or its supplements, were generated as part of clinical care and may be subject to patient confidentiality. All requests for raw and analyzed data and materials related to the patient presented in this article will be reviewed by the respective institution to verify if the request is subject to any intellectual property or confidentiality obligations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: Case report
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0030.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.048
GPT teacher head0.287
Teacher spread0.240 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes2
Has abstractyes

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Same venueAmerican Journal of Medical Genetics Part A→Same topicMitochondrial Function and Pathology→French-language works237,207→