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Record W4393060657 · doi:10.5943/mycosphere/14/1/22

Fungalpedia, an illustrated compendium of the fungi and fungus-like taxa

2023· article· en· W4393060657 on OpenAlexfundno aff
KD Hyde, TB Amuhenage, CCS Apurillo, Raheleh Asghari, Herbert Dustin Aumentado, AH Bahkali, Ishika Bera, Chitrabhanu S. Bhunjun, Mark S. Calabon, S Chandrasiri, KWT Chethana, Mingkwan Doilom, Wei Dong, Maryam Fallahi, SA Kapov, Sabin Khyaju, Le Li, CJY Li, QR Li, YX Li, Chuan-Gen Lin, MM Linn, Jian‐Kui Liu, Ning-Guo Liu, Thatsanee Luangharn, AD Madagammana, Ishara S. Manawasinghe, DS Marasinghe, E. H. C. McKenzie, N Meakala, QF Meng, Samhita Mukhopadhyay, Chada Norphanphoun, Dhandevi Pem, Chayanard Phukhamsakda, VV Sarma, F Selçuk, Indunil C. Senanayake, Syed Nasar Shah, YX Shu, HVS Silva, HL Su, Marzieh Tavakol, SAD Thakshila, Vinodhini Thiyagaraja, Naritsada Thongklang, Qing Tian, Saowaluck Tibpromma, ZL Tun, Merve Ulukapı, Yanfang Wang, N Wannasawang, NN Wijayawardene, SDMK Wimalasena, YR Xiong, WAE Yasanthika, Quan Li, DQ Dai

Bibliographic record

VenueMycosphere · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsnot available
FundersScience and Engineering Research BoardRussian Science FoundationKing Saud UniversityGuangzhou Municipal Science and Technology BureauInstitute of Population and Public HealthNational Research Council of ThailandNational Natural Science Foundation of China
KeywordsCompendiumBiologyTaxonFungusBotanyArchaeology

Abstract

fetched live from OpenAlex

Fungalpedia is an online illustrated compendium of the fungi and fungus-like taxa.In this database we provide notes on the genera and higher taxa of fungi and definitions and descriptions of terms generally used in mycology.Where possible the notes are enhanced with plates and drawings to make the terms easier to understand.In the case of genera, we provide 1) notes on habit, host and lifestyle, 2) higher level classification, 3) genes and other evidence to support the genus, 4) main characters, 5) a critical assessment of the genus and its placement, and 6) photographic plates and/or drawings of the main characters of the genus.For higher taxa we give similar information but a drawing will not be provided.For the various terms we provide definitions and explanations and diagrams to facilitate understanding.We also provide accounts of eminent mycologists both living and deceased.We also provide notes on methodology and biotechnology.Although many of the entries are by invited authors and published in scientific papers, other interested persons are welcome to contribute to entries and/or modify existing entries.Those interested should contact the lead author.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.008
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Review · Consensus signal: none
Teacher disagreement score0.147
Threshold uncertainty score0.491

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.008
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0110.009
Science and technology studies0.0010.001
Scholarly communication0.0040.003
Open science0.0020.002
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.1470.081

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.221
Teacher spread0.211 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations24
Published2023
Admission routes1
Has abstractyes

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