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Record W4393143255 · doi:10.1183/23120541.lsc-2024.5

Maternal diet mitigates the effects of prenatal air pollution exposure on DNA methylation of immune-relevant genes in cord blood

2024· article· en· W4393143255 on OpenAlexaff
Siu Fai Lee, Chandrika Konwar, Robert Balshaw, J Macisaac, Katia E. Ramadori, David Lin, Oscar Urtatiz, Kaja Z. LeWinn, Catherine J. Karr, S Sathyaravana, Alicia K. Smith, Michael S. Kobor, Kecia N. Carroll, Nicole R. Bush, Meaghan J. Jones

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldEnvironmental Science
TopicAir Quality and Health Impacts
Canadian institutionsUniversity of British ColumbiaUniversity of Manitoba
Fundersnot available
KeywordsCord bloodDNA methylationImmune systemGenePregnancyMethylationMedicineBiologyImmunologyGeneticsGene expression

Abstract

fetched live from OpenAlex

Prenatal air pollution exposure is associated with childhood asthma, but mechanisms underlying this association remain unclear. There is some evidence for biological embedding of prenatal air pollution exposure in fetal DNA methylation (DNAm), which may contribute to long-term changes in respiratory health. We used Illumina EPIC DNAm data from cord blood from the CANDLE study to determine whether DNAm links pregnancy-averaged NO2 PM2.5, or PM10 exposure with childhood persistent wheeze, transient wheeze, or diagnosed asthma, and whether maternal diet is associated with reductions in air pollution-associated DNAm changes. Using linear regression with significance thresholds of FDR<0.05 and effect size >5%, we found 19, seven, and six unique differentially methylated regions associated with prenatal NO2, PM2.5, or PM10, respectively, of which one, in HLA-DPA, mediated the association between both prenatal NO2 and PM2.5 and transient wheeze at age 4. Across the genome, maternal diet as measured by the Alternative Healthy Eating Index-Pregnancy moderated the effects of all air pollutants on DNAm in cord blood such that better quality diet reduced the impact of air pollution on DNAm. This same direction of moderation was observed with participation in an income supplementation program. Our results provide evidence of the biological embedding of prenatal air pollution and suggest specific pathways that may link air pollution exposure with childhood lung disease. In addition, our work suggests that programs to support high diet quality for low-income families may reduce the biological impact of air pollution on respiratory health in children.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.269
Teacher spread0.257 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2024
Admission routes1
Has abstractyes

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