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Record W4393156625 · doi:10.1101/2024.03.20.585141

Unveiling the control of N and P on DOM fate in a Mediterranean coastal environment

2024· preprint· en· W4393156625 on OpenAlexaff
Clara Dignan, Véronique Lenoble, Chiara Santinelli, Giancarlo Bachi, Duc Huy Dang, Nicole Garcia, Benjamin Misson

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2024
Typepreprint
Languageen
FieldEarth and Planetary Sciences
TopicMarine and coastal ecosystems
Canadian institutionsTrent University
FundersInterregMinistère de l'Enseignement Supérieur et de la Recherche
KeywordsMediterranean climateControl (management)GeographyOceanographyEconomicsGeologyArchaeologyManagement

Abstract

fetched live from OpenAlex

Abstract Dissolved organic matter (DOM) and heterotrophic prokaryotes (HP) are key players in the oceanic carbon cycle. Although several biotic and abiotic factors controlling DOM fates are known, the hierarchy of their respective influences is still debated. Two contrasting Mediterranean coastal sites were sampled: a harbour under strong continental and anthropogenic influence (T) and an open coastal area (G). Interestingly, similar dissolved organic carbon (DOC) concentrations were observed in both samples. However, they showed marked differences in dissolved inorganic nitrogen and organic phosphorus concentrations (60-fold and 80% higher value in T), as well as in DOM optical properties and molecular composition. Incubation experiments were performed to expose the HP communities of each site to dissolved substances from T and G for three weeks. DOC removal was similar (−10 %) regardless HP origin and dissolved substances characteristics. HP growth and their maximal abundance were higher (+ 300 %) with dissolved substances from T, regardless HP origins. This indicates different fates of DOC processed by microbial communities as a function of abiotic determinants. Higher HP growth was associated to elevated initial content and higher consumption of inorganic nitrogen, organic phosphorus, three fluorescent DOM components, nitrogen-containing molecules and carbohydrates. These results provide insights into the main drivers of marine DOM fate: at similar DOC concentrations and low inorganic P concentrations. We evience the preferential consumption of lignin-like compounds where theoretically more labile molecules were available, thus reinforcing the need of in depth molecular studies for a better understanding of DOM-microbes interactions in the ocean.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.184
Teacher spread0.173 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

Explore more

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