MétaCan
Menu
Back to cohort
Record W4393519557 · doi:10.5281/zenodo.8379917

3D-COSI ~ 3D Collection of Surgical Instruments

2023· dataset· en· W4393519557 on OpenAlexaff
Gijs Luijten, Christina Gsaxner, Antonio Pepe, Narmada Ambigapathy, Moon Kim, Xiaojun Chen, Jens Kleesiek, Frank Hölzle, Behrus Puladi, Jan Egger

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2023
Typedataset
Languageen
FieldEngineering
TopicAnatomy and Medical Technology
Canadian institutionsArtificial Intelligence in Medicine (Canada)
FundersAustrian Science Fund
KeywordsComputer science

Abstract

fetched live from OpenAlex

COSI - 3D STL Collection of Surgical Instruments Due to large file names, we have chosen to use https://www.7-zip.org/ which is 100% free and compatible with WinZip. If you encounter an error using WinZip, it's likely due to large file names, please use 7zip. Inside the repository, you will find an information overview "Overview.docx", a showcase video "Example video 3D instruments.mp4", STL files of 103 surgical instruments "Surgical Instruments.7z", examples of variations of the surgical instruments using Blender add-on or Python script build on the Trimesh library "Blender Part x of 8 ... 7z", or "Trimesh part x of 9 ... .7z". You will also find the used Blender Add On "MultiMesh.zip", measurements of virtual instruments and settings for the add-on (.xlsx), and the script that was used to perform these measurements inside a single folder, "Scripts, measurements and used Blender settings.7z". The proposed data collection consists of 103 3D-scanned medical instruments from the clinical routine, scanned with structured light scanners. The collection consists, for example, of instruments like retractors, forceps, and clamps. The collection is augmented by generating likewise models using 3D software, resulting in an inflated dataset for analysis. The collection can be used for general instrument detection and tracking in operating room settings or a freeform marker-less instrument registration for tool tracking in augmented reality. Furthermore, for medical simulation or training scenarios in virtual reality or mixed reality.Related article:Luijten, G., Gsaxner, C., Li, J. et al. 3D surgical instrument collection for computer vision and extended reality. Sci Data 10, 796 (2023). https://doi.org/10.1038/s41597-023-02684-0

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.042
Threshold uncertainty score0.996

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0050.013

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.236
Teacher spread0.217 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

Explore more

Same venueZenodo (CERN European Organization for Nuclear Research)Same topicAnatomy and Medical TechnologyFrench-language works237,207