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Record W4394459025 · doi:10.6084/m9.figshare.19588872

Additional file 14 of Virome in the cloaca of wild and breeding birds revealed a diversity of significant viruses

2022· dataset· en· W4394459025 on OpenAlexaff
Tongling Shan, Shixing Yang, Haoning Wang, Hao Wang, Ju Zhang, Ga Gong, Yuqing Xiao, Jie Yang, Xiaolong Wang, Juan Lü, Min Zhao, Zijun Yang, Xiang Lü, Ziyuan Dai, Yumin He, Xu Chen, Rui Zhou, Yuxin Yao, Ning Kong, Jian Zeng, Kalim Ullah, Xiaochun Wang, Quan Shen, Xutao Deng, Jianmin Zhang, Eric Delwart, Guangzhi Tong, Wen Zhang

Bibliographic record

VenueUWA Profiles and Research Repository (University of Western Australia) · 2022
Typedataset
Languageen
FieldAgricultural and Biological Sciences
TopicAnimal Virus Infections Studies
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsHuman viromeBiologyCloacaDiversity (politics)ZoologyEvolutionary biologyEcologyGeneticsMetagenomics

Abstract

fetched live from OpenAlex

Additional file 14: Supplementary Table 3. Number of sequence reads of the mapping analysis using the 707 virus genomes respectively against the 215 NGS data.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.007
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.508
Threshold uncertainty score0.701

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.007
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.003
Science and technology studies0.0010.000
Scholarly communication0.0020.001
Open science0.0020.001
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.5080.112

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.121
GPT teacher head0.294
Teacher spread0.173 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

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