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Record W4394773639 · doi:10.1109/tmi.2024.3388048

ULTRA-SR Challenge: Assessment of Ultrasound Localization and TRacking Algorithms for Super-Resolution Imaging

2024· article· en· W4394773639 on OpenAlexafffund
Marcelo Lerendegui, Kai Riemer, Γεώργιος Παπαγεωργίου, Bingxue Wang, Lachlan Arthur, Arthur Chavignon, Tao Zhang, Olivier Couture, Pingtong Huang, Md Ashikuzzaman, Stefanie Dencks, Chris Dunsby, Brandon Helfield, Jørgen Arendt Jensen, Thomas Lisson, Matthew R. Lowerison, Hassan Rivaz, Anthony E. Samir, Georg Schmitz, Scott Schoen, Ruud J. G. van Sloun, Pengfei Song, Tristan S.W. Stevens, Jipeng Yan, Vassilis Sboros, Meng‐Xing Tang

Bibliographic record

VenueIEEE Transactions on Medical Imaging · 2024
Typearticle
Languageen
FieldMedicine
TopicUltrasound Imaging and Elastography
Canadian institutionsConcordia University
FundersNational Institute of Biomedical Imaging and BioengineeringMedical Research CouncilCanada Research ChairsNational Institutes of HealthHorizon 2020 Framework ProgrammeEngineering and Physical Sciences Research CouncilRégion NormandieImperial College LondonZhejiang UniversityDeutsche ForschungsgemeinschaftNatural Sciences and Engineering Research Council of CanadaEuropean CommissionScience and Technology Facilities CouncilBritish Heart FoundationBurroughs Wellcome Fund
KeywordsGround truthComputer scienceBenchmark (surveying)AlgorithmArtificial intelligenceSoftwareTracking (education)Field (mathematics)Computer visionData miningMachine learning

Abstract

fetched live from OpenAlex

With the widespread interest and uptake of super-resolution ultrasound (SRUS) through localization and tracking of microbubbles, also known as ultrasound localization microscopy (ULM), many localization and tracking algorithms have been developed. ULM can image many centimeters into tissue in-vivo and track microvascular flow non-invasively with sub-diffraction resolution. In a significant community effort, we organized a challenge, Ultrasound Localization and TRacking Algorithms for Super-Resolution (ULTRA-SR). The aims of this paper are threefold: to describe the challenge organization, data generation, and winning algorithms; to present the metrics and methods for evaluating challenge entrants; and to report results and findings of the evaluation. Realistic ultrasound datasets containing microvascular flow for different clinical ultrasound frequencies were simulated, using vascular flow physics, acoustic field simulation and nonlinear bubble dynamics simulation. Based on these datasets, 38 submissions from 24 research groups were evaluated against ground truth using an evaluation framework with six metrics, three for localization and three for tracking. In-vivo mouse brain and human lymph node data were also provided, and performance assessed by an expert panel. Winning algorithms are described and discussed. The publicly available data with ground truth and the defined metrics for both localization and tracking present a valuable resource for researchers to benchmark algorithms and software, identify optimized methods/software for their data, and provide insight into the current limits of the field. In conclusion, Ultra-SR challenge has provided benchmarking data and tools as well as direct comparison and insights for a number of the state-of-the art localization and tracking algorithms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.045
metaresearch head score (Gemma)0.100
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.045
Threshold uncertainty score0.236

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0450.100
Meta-epidemiology (narrow)0.0040.001
Meta-epidemiology (broad)0.0030.003
Bibliometrics0.0060.004
Science and technology studies0.0020.002
Scholarly communication0.0050.005
Open science0.0070.006
Research integrity0.0060.004
Insufficient payload (model declined to judge)0.0040.006

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.321
Teacher spread0.304 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations34
Published2024
Admission routes2
Has abstractyes

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