MétaCan
Menu
← Back to cohort
Record W4394786842 · doi:10.5194/essd-2024-19-rc2

Comment on essd-2024-19

2024· peer-review· en· W4394786842 on OpenAlexafffund
Nicolas Schiffrine, Fatma Dhifallah, Kaven Dionne, Michel Poulin, Sylvie Lessard, Michel Gosselin

Bibliographic record

Venuenot available
Typepeer-review
Languageen
FieldMedicine
TopicRadiomics and Machine Learning in Medical Imaging
Canadian institutionsCanadian Museum of NatureUniversité du Québec à Rimouski
FundersNatural Sciences and Engineering Research Council of CanadaArcticNetFisheries and Oceans CanadaUniversité du Québec à Rimouski
KeywordsComputer science

Abstract

fetched live from OpenAlex

Abstract. The Arctic Ocean is currently undergoing significant transformations due to climate change, leading to profound changes in its microbial planktonic communities. These communities consist of a wide range of organisms, including photoautotrophic prokaryotes and eukaryotes, as well as heterotrophic, phagotrophic, and mixotrophic protistan species. Here, for simplicity, we refer to these single-celled species as phytoplankton. Within this diversity, potentially toxic and/or harmful algal species (hereafter abbreviated as “HA”) are of particular concern. These organisms have the potential to spread into Arctic waters, posing threats to both human and ecosystem health. Despite their importance, the spatial and temporal distribution of phytoplankton communities, including HA species, in the North American Arctic, remains poorly understood. To address this gap, we compiled and synthesized the largest possible body of data from different databases, individual published and unpublished datasets, and partitioned it into nine regions based on the Large Marine Ecosystem classification. Our dataset contains 385 800 individual georeferenced data points and 18 268 unique sampling events, revealing greater diversity than previously thought, with 1445 unique taxa. Heterokontophyta (which notably included diatoms) and Dinoflagellata were the most dominant phyla. Our results indicate distinct spatial patterns of diversity, with the highest diversity observed in Atlantic-influenced regions of the North American Arctic. For most of the HA species recorded in our database, no evidence was found for an increase in the northernmost latitude where HA species are observed over the years, meaning that there is no substantial spread of HA species into the North American part of the Arctic. Our study challenges the traditional view of the Arctic as being unsuitable for toxin-producing and harmful algae and highlights the importance of extensive and long-term sampling efforts to understand the region’s biodiversity. Overall, our findings provide new insights into the spatial patterns and biodiversity of phytoplankton and other protists in the North American Arctic and have implications for understanding the ecological functioning and response of this region to ongoing climate change.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.015
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: none
Teacher disagreement score0.382
Threshold uncertainty score0.881

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.015
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0020.001
Scholarly communication0.0040.002
Open science0.0030.002
Research integrity0.0160.007
Insufficient payload (model declined to judge)0.3820.285

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.373
Teacher spread0.345 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes2
Has abstractyes

Explore more

Same topicRadiomics and Machine Learning in Medical Imaging→French-language works237,207→