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Record W4394957535 · doi:10.5376/cge.2024.12.0007

A New Perspective on Revealing Tumor Heterogeneity through Single Cell RNA Sequencing

2024· article· en· W4394957535 on OpenAlex
Tao Chen

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueCancer Genetics and Epigenetics · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer Genomics and Diagnostics
Canadian institutionsnot available
Fundersnot available
KeywordsComputational biologyPerspective (graphical)Tumor heterogeneityRNABiologyGeneticsComputer scienceGeneArtificial intelligenceCancer

Abstract

fetched live from OpenAlex

This review paper mainly explores the application and prospects of single-cell RNA sequencing technology in the study of tumor heterogeneity. As an important concept in the field of oncology, tumor heterogeneity reveals the diversity and complexity of cells within a tumor, which has significant implications for tumor initiation, progression, treatment, and prognosis. However, traditional research methods have limitations in elucidating tumor heterogeneity. In recent years, the emergence of single-cell RNA sequencing technology has brought new breakthroughs to the study of tumor heterogeneity. This paper first introduces the concept and importance of tumor heterogeneity, then outlines the development and principles of single-cell RNA sequencing technology. Subsequently, it focuses on the specific applications of single-cell RNA sequencing in tumor heterogeneity research, including the identification of intra-tumoral cell subpopulations, the analysis of gene expression differences and regulatory networks, and the investigation of interactions among tumor cells. Finally, the contributions of single-cell RNA sequencing in tumor heterogeneity research are summarized, and future research directions are prospected.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.125
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.290
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it