Bibliographic record
Abstract
A dataset containing 76806 species occurrences available in GBIF matching the query: { "and" : [ "TaxonKey is one of (Balaenoptera physalus (Linnaeus, 1758), Tamias amoenus luteiventris J.A.Allen, 1890, Tamias sonomae alleni (A.H.Howell, 1922), Thomomys umbrinus enixus Nelson & Goldman, 1934, Eptesicus nilssonii parvus Kishida, 1932, Myotis oxyotus gardneri LaVal, 1973, Myotis adversus carimatae Miller, 1906, Thomomys pygmaeus, Valenictus chulavistensis Deméré, 1994, Megaderma vireti Mein, 1965, Parahippus cognatus (Leidy, 1858), Tisisthenes parvus (Martin, 1973), Ruticeros compressa Prasad, 1974, Odoichoerus uniconus Tong & Zhao, 1986, Centetodon bembicophagus Lillegraven et al., 1981, Eudaemonema cuspidata Simpson, 1935, Dryomys apulus Freudenthal & Martín-Suárez, 2006, Sayimys perplexus Wood, 1937, Cupidinimus magnus (Kellogg, 1910), Cricetodon aureus Mein & Freudenthal, 1971, Bubogonia bombadili (Van Valen, 1978), Scotophilus celebensis (Sody, 1928), Platyrrhinus infuscus (Peters, 1880), Macrotis leucura (Thomas, 1887), Mazama chunyi Hershkovitz, 1959, Sciurus granatensis maracaibensis Hershkovitz, 1947, Sciurus variegatoides adolphei Lesson, 1842, Pipistrellus rueppellii senegalensis Dorst, 1960, Aotus lemurinus griseimembra Elliot, 1912, Propithecus diadema diadema, Macaca sinica opisthomelas Hill, 1942, Cryptonanus agricolai (Moojen, 1943), Cremnomys medius Thomas, 1916, Artimonius australis (Bown & Rose, 1987), Ursus arctos horribilis Ord, 1815, Mustela erminea erminea, Peromyscus polionotus polionotus, Amblysomus hottentotus hottentotus, Redunca fulvorufula fulvorufula, Kerivoula argentata argentata, Myotis levis levis, Madakoala wellsi Woodburne et al., 1987, Pildra tertius Woodburne et al., 1987, Megoreodon grandis (Douglass, 1907), Karydomys debruijni Maridet et al., 2011, Kukaodonta robusta Mackness, 2010, Tusciziphius atlanticus Bianucci, Miján, Lambert, Post, Post & Mateus, 2013, Ernestokokenia patagonica (Ameghino, 1901), Mizquedelphys pilpinensis Marshall & de Muizon, 1988, Desmatippus tyleri (Loomis, 1908), Neosteiromys tordillense Vucetich et al., 1993, Halmaselus valens Ameghino, 1891, Cimolomys digona Marsh, 1889, Uintatherium insperatus Tong & Wang, 1981, Graphiurus murinus cuazensis, Microtus mexicanus guadalupensis Bailey, 1902, Mus musculus kalehpeninsularis Goodwin, 1940, Potamochoerus choeropotamus, Crocidura luna schistacea, Ontocetus oxymycterus (Kellogg, 1925), Nyctomys sumichrasti venustulus Goldman, 1916, Reithrodontomys megalotis peninsulae, Rattus rattus robinsoni Chasen, 1940, Reithrodontomys fulvescens toltecus, Cratogeomys castanops goldmani Merriam, 1895, Perognathus pacificus Mearns, 1898, Dinoceras lacustris Marsh, 1872, Tienshanilophus lianmuqinensis Tong, 1978, Bubalus centralis, Phascogale affinis Gray, 1841, Osgoodomys banderanus banderanus, Xerospermophilus spilosoma obsoletus (Kennicott, 1863), Neotoma leucodon latifrons, Microtus longicaudus halli, Peromyscus banderanus, Indricotherium asiaticum (Borissiak, 1923), Mustela aureoventris Gray, 1864, Ovis nahoor szechuanensis Rothschild, 1922, Ursus russelli Merriam, 1914, Systemodon semihians (Cope, 1882), Tomitherium angulatum (Cope, 1875), Huananothema imparilica Tang, 1978, Prosthennops brachirostris (Shotwell, 1956), Euderma maculatum (J.A.Allen, 1891), Emballonura sulcata Miller, 1911, Emballonura monticola Temminck, 1838, Uroderma magnirostrum Davis, 1968, Liberiictis kuhni Hayman, 1958, Crocidura mindorus Miller, 1910, Crocidura tarfayensis Vesmanis & Vesmanis, 1980, Peromyscus stephani Townsend, 1912, Oryzomys ratticeps (Hensel, 1872), Madoqua saltiana (Blainville, 1816), Alces americanus cameloides (Milne-Edwards, 1867), Dipodomys ordii chapmani Mearns, 1890, Xerus rutilus intensus Thomas, 1904, Paraxerus cepapi soccatus Wroughton, 1909, Thomomys bottae mewa Merriam, 1908, Micaelamys namaquensis (A.Smith, 1834), Coleura seychellensis silhouettae Thomas, 1915, Aethalops alecto ocypete Boeadi & Hill, 1986, Rhinolophus affinis andamanensis Dobson, 1872, Microcebus griseorufus Kollman, 1910, Mesohippus trigonostylus (Osborn, 1918), Entomodon comptus (Marsh, 1872), Sthenictis lacota (Matthew & Gidley, 1904), Parablastomeryx galushi Frick, 1937, Lomacetus ginsburgi Muizon, 1986, Trogomys rupinimenthae Reeder, 1960, Presbymys lophatus Wilson, 1949, Hemiacodon casamissus Beard et al., 1992, Petrolemur brevirostre Tong, 1979, Dakotadens morrowi Eaton, 1993, Parastrapotherium cingulatum (Ameghino, 1894), Hipposideros jonesi Hayman, 1947, Lycaon pictus lupinus Thomas, 1902, Petaurista petaurista nitidula Thomas, 1900, Pipistrellus kuhlii lepidus Blyth, 1845, Saguinus bicolor bicolor, Sorex shinto saevus Thomas, 1907, Archaeotherium marshi Troxell, 1920, Peromyscus polionotus subgriseus (Chapman, 1893), Ictonyx striatus albescens Heller, 1913, Vulpes vulpes alascensis Merriam, 1900, Urocyon cinereoargenteus furvus G.M.Allen & Barbour, 1923, Felis margarita thinobia (Ognev, 1927), Isoodon auratus barrowensis (Thomas, 1901), Genetta genetta genetta, Talpa caeca caeca, Chaetodipus eremicus eremicus, Balaena glacialis Borowski, 1781, Evotomys dawsoni Merriam, 1888, Plecotus kozlovi Bobrinskii, 1926, Lemmus borealis Nilsson, 1820, Proentelodon minutus Vislobokova, 2008, Mesatirhinus superior (Riggs, 1912), Nothocyon insularis White, 1942, Toxodon protoburmeisteri Ameghino, 1887, Xyophorus sulcatus Ameghino, 1891, Thinohyus osmonti (Sinclair, 1905), Petaurus breviceps tafa Tate & Archbold, 1935, Canis proplatensis Ameghino, 1902, Amphicyon angustidens (Marsh, 1871), Proharrymys wahlerti Korth & Branciforte, 2007, Crocidura lwiroensis Kerbis Peterhans & Hutterer, 2013, Pronolagus ruddi randensis Jameson, 1907, Scapanus mesolatimanus, Lutra indica Gray, 1837, Lepus judeae Gray, 1867, Baiomys musculus grisescens Goldman, 1932, Oreamnos americanus columbiae Hollister, 1912, Crocidura munissii Stanley, Hutterer, Giarla & Esselstyn, 2015, Ictidomys tridecemlineatus monticola (A.H.Howell, 1928), Lepus oiostolus illuteus Thomas, 1914, Acinonyx studeri (Savage, 1960), Meniscotherium tapiacitis Cope, 1882, Vulpes shermanensis (Hibbard, 1937), Iberolophus arabensis Badiola & Cuesta, 2008, Presbytis melalophus (Raffles, 1822), Rhinolophus coelophyllus Peters, 1867, Suncus ater Medway, 1965, Suncus lixus (Thomas, 1898), Crocidura wuchihensis Wang, 1966, Petinomys setosus (Temminck, 1844), Ammospermophilus interpres (Merriam, 1890), Peromyscus californicus (Gambel, 1848), Lamottemys okuensis F.Petter, 1986, Grammomys macmillani (Wroughton, 1907), Hydropotes inermis Swinhoe, 1870, Cervus nippon keramae (Kuroda, 1924), Dactylomys dactylinus modestus Lönnberg, 1921, Dremomys pernyi senex G.M.Allen, 1912, Gerbilliscus inclusus (Thomas & Wroughton, 1908), Oryzomys maracajuensis Langguth & Bonvicino, 2002, Necromys lenguarum (Thomas, 1898), Cynopterus sphinx babi Lyon, 1916, Cynopterus horsfieldii princeps Miller, 1906, Myotis nigricans osculatii (Cornalia, 1849), Saguinus nigricollis hernandezi Hershkovitz, 1982, Varecia variegata editorum (O.Hill, 1953), Coniopternium andinum Ameghino, 1894, Scelidodon chiliense (Lydekker, 1886), Lophiaspis maurettei Depéret, 1910, Prosansanosmilus peregrinus Heizmann et al., 1980, Vulpavus ovatus Matthew, 1909, Merycochoerus carrikeri (Peterson, 1907), Allodelphis pratti Wilson, 1935, Africanacetus ceratopsis Bianucci, Lambert & Post, 2007, Tayassu edensis (Frick, 1921), Caenotherium laticurvatum (Geoffroy, 1833), Notiosorex repenningi Lindsay & Jacobs, 1985, Sorex taylori Hibbard, 1937, Apatemys rodens Troxell, 1923, Lepus benjamini Hay, 1921, Palaearctomys montanus Douglass, 1903, Mookomys formicarum (Wood, 1935), Tuscahomys minor Dawson & Beard, 2007, Cricetodon schaubi (Zdansky, 1930), Synaptomys bunkeri Hibbard, 1939, Phenacomys gryci Repenning, 1987, Castoroides ohioensis Foster, 1838, Prolimnocyon eerius Gingerich, 1989, Acmeodon secans Matthew & Granger, 1921, Bulaklestes kezbe Nessov, 1985, Dryomomys szalayi Bloch et al., 2007)", "HasCoordinate is true" ] } The dataset includes 76806 records from 281 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0194641-200613084148143/datasets/export for details. Data from some individual datasets included in this download may be licensed under less restrictive terms.
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.001 | 0.006 |
| Meta-epidemiology (narrow) | 0.002 | 0.001 |
| Meta-epidemiology (broad) | 0.002 | 0.002 |
| Bibliometrics | 0.007 | 0.010 |
| Science and technology studies | 0.001 | 0.000 |
| Scholarly communication | 0.004 | 0.004 |
| Open science | 0.003 | 0.004 |
| Research integrity | 0.003 | 0.002 |
| Insufficient payload (model declined to judge) | 0.312 | 0.431 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".