Bibliographic record
Abstract
A dataset containing 56058 species occurrences available in GBIF matching the query: { "and" : [ "TaxonKey is one of (Kerivoula titania Bates, Struebig, Hayes, Furey, Mya Mya, Thong, Tien, Son, Harrison, Francis & Csorba, 2007, Megaloceros giganteus (Blumenbach, 1799), Zapus hudsonius preblei Krutzsch, 1954, Leopardus pardalis nelsoni (Goldman, 1925), Ochotona dauurica bedfordi Thomas, 1908, Odocoileus hemionus cerrosensis Merriam, 1898, Tupaia tana lingae (Lyon, 1913), Dipodomys microps microps, Cavia aperea aperea, Epomophorus gambianus gambianus, Sorex personatus Brown, 1908, Microtus arcturus Thomas, 1912, Neotoma arizonae Merriam, 1893, Chiropotes ater Gray, 1870, Saguinus leucogenys (Gray, 1866), Marmosa constantiae O.Thomas, 1904, Enhydriodon sivalensis Falconer, 1868, Pyrotherium romerii Ameghino, 1888, Cormohipparion emsliei Hulbert, 1988, Pliohippus fairbanksi (Merriam, 1915), Oligopithecus rogeri Gheerbrant et al., 1995, Lutra mitis Thomas, 1908, Entelodon orientalis Dashzeveg, 1965, Amphicticeps shackelfordi Matthew & Granger, 1924, Triacodon nanus Marsh, 1872, Posteutatus indemnis Ameghino, 1902, Gazella deperdita (Gervais, 1848), Arctonyx leucolaemus orestes Thomas, 1911, Microtus pennsylvanicus arcticus Cowan, 1951, Macroscelides pulcher (Thomas, 1894), Herpestes badius Smith, 1838, Galago minor Gray, 1842, Sigmodon toltecus toltecus, Heteromys desmarestianus psakastus, Macacus cynomolgus cumingii Gray, 1870, Paraxerus flavivittis ibeanus, Anchitherium aurelianense steinheimense Abusch-Siewert, 1983, Praomys aeta, Talpa micrura Hodgson, 1841, Arctomys nevadensis (Kellogg, 1910), Megaderma spasma niasense Lyon, 1916, Ictonyx erythraea De Winton, 1898, Bothriomys catenatus Ameghino, 1889, Peromyscus valensis (Shotwell, 1967), Homo sapiens Linnaeus, 1758, Lepilemur edwardsi (Forsyth Major, 1894), Macaca tonkeana (Meyer, 1899), Hyosciurus heinrichi Archbold & Tate, 1935, Sundasciurus lowii (Thomas, 1892), Maxomys surifer (Miller, 1900), Allocricetulus curtatus (G.M.Allen, 1925), Scolomys melanops Anthony, 1924, Geomys bursarius (Shaw, 1800), Diplomys caniceps (Günther, 1877), Thylogale thetis (Lesson, 1828), Physeter bidens Sowerby, 1804, Tayassu pecari aequatoris (Lönnberg, 1921), Sus oliveri Groves, 1997, Chaetodipus californicus femoralis (J.A.Allen, 1891), Dremomys rufigenis adamsoni Thomas, 1914, Ratufa bicolor leucogenys Kloss, 1916, Thomomys talpoides medius Goldman, 1939, Balionycteris maculata seimundi Kloss, 1921, Vespadelus regulus (Thomas, 1906), Myotis daubentonii loukashkini Shamel, 1942, Myotis horsfieldii deignani Shamel, 1942, Basilosaurus cetoides (Owen, 1839), Prohegetotherium sculptum Ameghino, 1897, Moeritherium gracile Andrews, 1902, Antilohyrax pectidens Rasmussen & Simons, 2000, Equus niobrarensis Hay, 1913, Quercygale angustidens (Filhol, 1872), Pseudoeotragus seegrabensis van der Made, 1989, Desmathyus siouxensis (Peterson, 1906), Caenomeryx filholi (Lydekker, 1885), Scraeva hatherwoodensis Cray, 1973, Peridyromys lavocati Pelaez-Campomanes & Daams, 2002, Karydomys dzerzhinskii Kordikova & de Bruijn, 2001, Pantolestes natans Matthew, 1909, Groebertherium novasi Bonaparte, 1986, Mustela erminea kadiacensis (Merriam, 1896), Anomalurus pusillus Thomas, 1887, Rhynchocyon petersi adersi Dollman, 1912, Petaurista petaurista lumholtzi Gyldenstolpe, 1920, Nycticebus ornatus Thomas, 1921, Mungotictis substriatus Pocock, 1915, Gomphotherium osborni (Barbour, 1916), Lepus arcticus bangsii Rhoads, 1896, Neophocaena phocaenoides asiaeorientalis (Pilleri & Gihr, 1972), Neofelis nebulosa nebulosa, Orycteropus afer afer, Chaetodipus nelsoni nelsoni, Rousettus leschenaultii leschenaultii, Microtus innuitus Merriam, 1900, Spilogale ambarvalis Bangs, 1898, Peradectes gulottai Rose, 2010, Peltephilus depressus Ameghino, 1897, Plagiocoelus obliquus Ameghino, 1894, Herpestes gracilis Rüppell, 1836, Griphodon peruvianus Anthony, 1924, Promerycochoerus superbus (Leidy, 1870), Nanolestes drescherae Martin, 2002, Asmithwoodwardia subtrigona Ameghino, 1901, Arginbaatar dimitrievae Trofimov, 1980, Balaena emarginata (Owen, 1843), Paraceratherium bugtiense Forster Cooper, 1911, Merychippus seversus (Cope, 1878), Tamquammys dispinorum Tong, 1997, Paracricetops virgatoincisus Maridet & Ni, 2013, Eurysodon nasutus Mercerat, 1891, Phoberomys burmeisteri Kraglievich, 1926, Oldfieldthomasia plicata Ameghino, 1904, Rhinoceros philippinensis von Koenigswald, 1956, Ursus arvernensis Croizet & Jobert, 1828, Agustylus bardus (Ameghino, 1889), Anomoemys lohiculus (Matthew & Granger, 1923), Triacodon grandis Marsh, 1872, Lepus californicus sheldoni Burt, 1933, Epomophorus pousarguesi Trouessart, 1904, Peromyscus truei preblei Bailey, 1936, Ictidomys tridecemlineatus texensis (Merriam, 1898), Genetta letabae Thomas & Schwann, 1906, Lemniscomys rosalia spinalis, Sorex caecutiens buxtoni, Potamochoerus intermedius Leakey, 1965, Notopteris macdonaldi neocaledonica Trouessart, 1908, Sorex ornatus californicus Merriam, 1895, Crocidura fumosa johnstoni Dollman, 1915, Eliomys quercinus dalmaticus Dulic & Felten, 1962, Echymipera gargantua, Sinclairella simplicidens, Marmota monax preblorum A.H.Howell, 1914, Phenacomys ungava mackenzii, Meniscoessus brevis verified, Presbytis obscura smithii Kloss, 1916, Arvicola terrestris obensis Egorin, 1939, Pteropus vampyrus malaccensis Andersen, 1908, Antilope dorcas (Pallas, 1766), Parastrapotherium crassum Ameghino, 1902, Protomeryx leonardi (Loomis, 1911), Eucinepeltus petesatus Ameghino, 1891, Elephas meridionalis (Nesti, 1825), Pantolestes chacensis (Cope, 1875), Diplotremus agrestis Ameghino, 1889, Paraphiomys pigotti Andrews, 1914, Democricetodon khani de Bruijn et al., 1981, Barbastella darjelingensis (Hodgson, 1855), Histiotus alienus Thomas, 1916, Sturnira aratathomasi Peterson & Tamsitt, 1968, Sorex gaspensis Anthony & Goodwin, 1924, Callicebus moloch (Hoffmannsegg, 1807), Lepus othus Merriam, 1900, Spermophilus armatus Kennicott, 1863, Abditomys latidens (Sanborn, 1952), Neotoma nelsoni Goldman, 1905, Thomasomys cinereiventer J.A.Allen, 1912, Sus barbatus oi Miller, 1902, Heteromys anomalus hershkovitzi Hernández-Camacho, 1956, Spermophilus suslicus suslicus, Paraxerus ochraceus animosus Dollman, 1911, Thomomys bottae actuosus Kelson, 1951, Thomomys talpoides caryi Bailey, 1914, Cratogeomys castanops dalquesti Hollander, 1990, Miniopterus inflatus rufus Sanborn, 1936, Myotis keaysi pilosotibialis LaVal, 1973, Rhinolophus affinis himalayanus K.Andersen, 1905, Rhinolophus affinis hainanus J.A.Allen, 1906, Glaucodon ballaratensis Stirton, 1957, Ameribaatar zofiae Eaton & Cifelli, 2001, Miohippus acutidens (Sinclair, 1905), Parahippus agrestis (Leidy, 1873), Tapirus polkensis (Olsen, 1960), Palaeogale sectoria (Gervais, 1848), Hypisodus retallacki Meehan & Martin, 2004, Aprixokogia kelloggi Whitmore & Kaltenbach, 2008, Albertocetus meffordorum Uhen, 2008, Cokia kowalskae Storch, 1995, Sorex pseudoalpinus Rzebik-Kowalska, 1991, Pseudodryomys robustus de Bruijn, 1967, Aratomys multifidus Zazhigin, 1977, Sciuravus wilsoni Gazin, 1961, Ischyromys douglassi (Black, 1968), Palaeosinopa nunavutensis Eberle & McKenna, 2002, Esthonyx bisulcatus Cope, 1874, Amblotherium gracilis (Marsh, 1879), Kielantherium gobiensis (Dashzeveg, 1975), Hylobates muelleri Martin, 1841, Aotus infulatus (Kuhl, 1820), Sciurus pyrrhinus Thomas, 1898, Mazama temama reperticia Goldman, 1913, Sciurus granatensis manavi (J.A.Allen, 1914), Nyctimene major scitulus K.Andersen, 1910, Rhinopoma hardwickii sondaicum Van Cakenberghe & De Vree, 1994, Hydrochoerus hydrochaeris (Linnaeus, 1766), Crocidura klossi Robinson, 1912, Bassariscus astutus insulicola Nelson & Goldman, 1909, Lepus europaeus parnassius Miller, 1903, Phalanger orientalis breviceps (Thomas, 1888), Orthogeomys grandis grandis, Tonatia saurophila Koopman & Williams, 1951, Musseromys gulantang Heaney, Balete, Rickart, Veluz & Jansa, 2009, Pitymys planiceps Miller, 1908, Otospermophilus variegatus (Erxleben, 1777), Acrocodia indica (Desmarest, 1819), Bubalus bubalis bubalis, Chilonatalus macer (Miller, 1914), Zegdoumys lavocati Vianey-Liaud et al., 1994, Perimys transversus Ameghino, 1902, Pleurostylodon limpidus Ameghino, 1904, Tychostylops marculus Ameghino, 1901, Hyracotherium leporinum Owen, 1841, Chriacus pusillus Simpson, 1935, Hapalops diverssidens Ameghino, 1891, Afrodon gheerbranti De Bast et al., 2012, Pascualdelphys fierroensis Flynn & Wyss, 1999, Disteiromys graciloides Ameghino, 1904, Woutersia butleri Sigogneau-Russell & Hahn, 1995, Prodolichotis pridiana Fields, 1957, Mesohippus meteulophus (Osborn, 1904), Lushilagus lohoensis Li, 1965, Euarctos vitabilis Gidley, 1913, Castor accessor Hay, 1927, Semnopithecus vetulus vetulus, Cercopithecus talapoin ansorgei Pocock, 1907, Procavia daemon Thomas, 1910, Meriones libycus iranensis, Crustulus fontanus Clemens, 2017, Myodes gapperi wrangeli, Thomomys umbrinus mohavensis, Crocidura hindei marrensis Thomas & Hinton, 1923, Parmularius altidens Hopwood, 1934, Chrysochloris fosteri St.Leger, 1931, Myotis secundus Ruedi, Csorba, L.-K.Lin & C.-H.Chou, 2015, Toxodontherium reverendum Ameghino, 1889, Eucricetodon nanoides Freudenthal, 1996, Eucricetodon huberi (Schaub, 1925), Eumetopias californiana (Lesson, 1828), Protechimys lebratierensis Vianey-Liaud, 1998, Gardnerycteris crenulatum longifolium (Wagner, 1843), Rhytiodus capgrandi (Lartet, 1866), Neoclaenodon procyonoides (Matthew, 1937), Poecilictis libyca (Hemprich & Ehrenberg, 1833), Sylvilagus bachmani peninsularis (J.A.Allen, 1898), Toromys albiventris, Philetor brachypterus (Temminck, 1840), Hesperoptenus blanfordi (Dobson, 1877), Diphylla ecaudata Spix, 1823, Crocidura mutesae Heller, 1910)", "HasCoordinate is true" ] } The dataset includes 56058 records from 285 constituent datasets; see https://api.gbif.org/v1/occurrence/download
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.001 | 0.005 |
| Meta-epidemiology (narrow) | 0.002 | 0.001 |
| Meta-epidemiology (broad) | 0.002 | 0.002 |
| Bibliometrics | 0.006 | 0.010 |
| Science and technology studies | 0.001 | 0.000 |
| Scholarly communication | 0.003 | 0.003 |
| Open science | 0.002 | 0.004 |
| Research integrity | 0.002 | 0.002 |
| Insufficient payload (model declined to judge) | 0.343 | 0.431 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".