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Record W4395346823 · doi:10.15468/dl.8a5m9j

Occurrence Download

2023· dataset· en· W4395346823 on OpenAlexaboutno aff

Bibliographic record

VenueGlobal Biodiversity Information Facility · 2023
Typedataset
Languageen
FieldEarth and Planetary Sciences
TopicMarine Invertebrate Physiology and Ecology
Canadian institutionsnot available
Fundersnot available
KeywordsDownloadComputer scienceWorld Wide Web

Abstract

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A dataset containing 550174 species occurrences available in GBIF matching the query: { "and" : [ "Country is one of (Canada, United States of America)", "OccurrenceStatus is Present", "TaxonKey is one of (Ciona intestinalis (Linnaeus, 1767), Ciona tenella (Stimpson, 1852), Styela clava Herdman, 1881, Ascidiella aspersa (Müller, 1776), Botryllus schlosseri (Pallas, 1766), Botrylloides violaceus Oka, 1927, Butomus umbellatus L., Cabomba caroliniana A.Gray, Caprella mutica Schurin, 1935, Hypophthalmichthys nobilis (Richardson, 1845), Hypophthalmichthys molitrix (Valenciennes, 1844), Ctenopharyngodon idella (Valenciennes, 1844), Cyprinus rubrofuscus Lacepède, 1803, Cyprinus carpio rubrofuscus Lacepède, 1803, Cyprinus carpio carpio, Mylopharyngodon piceus (Richardson, 1846), Carassius gibelio (Bloch, 1782), Trapa natans L., Bythotrephes longimanus Leydig, 1860, Codium fragile subsp. fragile, Eriocheir sinensis H.Milne Edwards, 1853, Hemigrapsus sanguineus (De Haan, 1835), Carcinus maenas (Linnaeus, 1758), Lepomis cyanellus Rafinesque, 1819, Hemimysis anomala G.O.Sars, 1907, Dikerogammarus villosus (Sowinsky, 1894), Didemnum vexillum Kott, 2002, Didemnum vexillum Romanov, 1989, Diplosoma listerianum (Milne Edwards, 1841), Diplosoma listeri Lahille, 1890, Diplosoma gelatinosum (Milne Edwards, 1841), Faxonius rusticus (Girard, 1852), Orconectes rusticus (Girard, 1852), Procambarus clarkii (Girard, 1852), Procambarus virginalis Lyko, 2017, Procambarus fallax f. virginalis Martin, Dorn, Kawai, van der Heiden & Scholtz, 2010, Egeria densa Planch., Anacharis densa (Planch.) Vict., Elodea densa (Planch.) Casp., Nymphoides peltata (S.G.Gmel.) Kuntze, Scardinius erythrophthalmus (Linnaeus, 1758), Glyceria maxima (Hartm.) Holmb., Glyceria altissima (Moench ex Gilib.) P.Fourn., Glyceria aquatica (L.) Wahlb., Glyceria spectabilis Mert. & W.D.J.Koch, Proterorhinus semilunaris (Heckel, 1837), Proterorhinus marmoratus (Pallas, 1814), Neogobius melanostomus (Pallas, 1814), Gymnocephalus cernuus (Linnaeus, 1758), Gymnocephalus cernua (Linnaeus, 1758), Acerina cernua (Linnaeus, 1758), Hydrilla verticillata (L.f.) Royle, Hydrilla verticillata F.Muell., Hydrilla verticillata C.Presl, 1845, Hydrocharis morsus-ranae L., Iris pseudacorus L., Eichhornia crassipes (Mart.) Solms, Pontederia crassipes Mart., Piaropus crassipes (Mart.) Britton, 1893, Piaropus crassipes (Mart.) Raf., Pistia stratiotes L., Membranipora membranacea (Linnaeus, 1767), Dreissena bugensis (Andrusov, 1897), Dreissena rostriformis (Deshayes, 1838), Dreissena polymorpha (Pallas, 1771), Dreissena polymorpha (Pallas, 1771), Myriophyllum spicatum L., Myriophyllum spicatum S.G.Gmel., Myriophyllum aquaticum (Vell.) Verdc., Myriophyllum brasiliense Cambess., Enydria aquatica Vell., Potamopyrgus antipodarum (J.E.Gray, 1843), Astronotus ocellatus (Agassiz, 1831), Corbicula fluminea (O.F.Müller, 1774), Echinogammarus ischnus (Stebbing, 1899), Chaetogammarus ischnus (Stebbing, 1899), Najas minor All., Phragmites australis (Cav.) Trin. ex Steud., Phragmites communis Trin., Carassius auratus (Linnaeus, 1758), Channidae, Parachanna Teugels & Daget, 1984, Channa argus (Cantor, 1842), Potamogeton crispus L., Potamogeton crispus Laterr., Potamogeton crispus Darl., Cercopagis pengoi (Ostroumov, 1891), Rorippa amphibia (L.) Besser, Lythrum salicaria L., Oncorhynchus gorbuscha (Walbaum, 1792), Stratiotes aloides L., Tinca tinca (Linnaeus, 1758), Cipangopaludina chinensis (J.E.Gray, 1833), Cipangopaludina chinensis Reeve, 1863, Cipangopaludina chinensis (Griffith & Pidgeon, 1865), Bellamya chinensis (J.E.Gray, 1833), Viviparus georgianus (I.Lea, 1834), Vivipara contectoides W.G.Binney, 1865, Callinina georgiana (I.Lea, 1834), Nitellopsis obtusa (Desv.) J.Groves, Thermocyclops crassus (Fischer, 1853), Limnoperna fortunei (Dunker, 1857), Micropterus salmoides (Lacepède, 1802))" ] } The dataset includes 550174 records from 452 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0257660-220831081235567/datasets/export for details. Data from some individual datasets included in this download may be licensed under less restrictive terms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.006
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.743
Threshold uncertainty score0.861

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.006
Meta-epidemiology (narrow)0.0030.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0070.010
Science and technology studies0.0010.000
Scholarly communication0.0040.004
Open science0.0030.004
Research integrity0.0030.002
Insufficient payload (model declined to judge)0.2570.379

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.199
Teacher spread0.183 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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