Bibliographic record
Abstract
A dataset containing 437310 species occurrences available in GBIF matching the query: { "and" : [ "TaxonKey is one of (Ortalis wagleri G.R.Gray, 1867, Ortalis poliocephala (Wagler, 1830), Dendrortyx barbatus Gould, 1846, Dendrortyx macroura (Jardine & Selby, 1828), Philortyx fasciatus (Gould, 1844), Geotrygon carrikeri (Wetmore, 1941), Nyctiphrynus mcleodii (Brewster, 1888), Caprimulgus salvini Hartert, 1892, Cypseloides storeri Navarro, Peterson, Escalante & Benitez, 1992, Streptoprocne semicollaris (DeSaussure, 1859), Lophornis brachylophus R.T.Moore, 1949, Doricha eliza (R.Lesson & Delattre, 1839), Calothorax pulcher Gould, 1859, Atthis heloisa (R.Lesson & Delattre, 1839), Chlorostilbon auriceps (Gould, 1852), Chlorostilbon forficatus Ridgway, 1885, Cynanthus sordidus (Gould, 1859), Campylopterus excellens (Wetmore, 1941), Eupherusa cyanophrys J.S.Rowley & Orr, 1964, Eupherusa poliocerca D.G.Elliot, 1871, Amazilia viridifrons (D.G.Elliot, 1871), Hylocharis xantusii (Lawrence, 1861), Rallus tenuirostris, Oceanodroma macrodactyla W.E.Bryant, 1887, Megascops seductus (R.T.Moore, 1941), Glaucidium sanchezi Lowery & R.J.Newman, 1949, Glaucidium palmarum Nelson, 1901, Trogon citreolus Gould, 1835, Momotus momota (Linnaeus, 1766), Melanerpes chrysogenys (Vigors, 1839), Melanerpes hypopolius (Wagler, 1829), Picoides stricklandi (Malherbe, 1845), Piculus auricularis (Salvin & Godman, 1889), Campephilus imperialis (Gould, 1832), Rhynchopsitta pachyrhyncha (Swainson, 1827), Rhynchopsitta terrisi R.T.Moore, 1947, Forpus cyanopygius (Souance, 1856), Amazona finschi (P.L.Sclater, 1864), Lepidocolaptes leucogaster (Swainson, 1827), Xenotriccus mexicanus (Zimmer, 1938), Deltarhynchus flammulatus (Lawrence, 1875), Vireo hypochryseus P.L.Sclater, 1863, Vireo brevipennis (P.L.Sclater, 1858), Vireo nelsoni Bond, 1936, Vireo bairdi Ridgway, 1885, Cyanolyca mirabilis Nelson, 1903, Cyanolyca nanus (Du Bus de Gisignies, 1847), Calocitta colliei (Vigors, 1829), Cyanocorax dickeyi R.T.Moore, 1935, Cyanocorax sanblasianus (Lafresnaye, 1842), Cyanocorax beecheii (Vigors, 1829), Aphelocoma ultramarina (Bonaparte, 1825), Hylorchilus sumichrasti (Lawrence, 1871), Hylorchilus navai Crossin & Ely, 1973, Troglodytes sissonii (Grayson, 1868), Troglodytes tanneri C.H.Townsend, 1890, Campylorhynchus megalopterus Lafresnaye, 1845, Campylorhynchus chiapensis Salvin & Godman, 1891, Campylorhynchus gularis P.L.Sclater, 1861, Campylorhynchus jocosus P.L.Sclater, 1860, Pheugopedius felix (P.L.Sclater, 1860), Thryophilus sinaloa S.F.Baird, 1864, Polioptila nigriceps S.F.Baird, 1864, Catharus occidentalis P.L.Sclater, 1859, Turdus rufopalliatus Lafresnaye, 1840, Ridgwayia pinicola (P.L.Sclater, 1859), Melanotis caerulescens (Swainson, 1827), Toxostoma ocellatum (P.L.Sclater, 1862), Toxostoma guttatum (Ridgway, 1885), Toxostoma cinereum (Xantus de Vesey, 1860), Mimus graysoni (Lawrence, 1871), Arremon virenticeps (Bonaparte, 1855), Atlapetes albinucha (d'Orbigny & Lafresnaye, 1838), Atlapetes pileatus Wagler, 1831, Pipilo ocai (Lawrence, 1865), Aimophila notosticta (P.L.Sclater & Salvin, 1868), Melozone kieneri (Bonaparte, 1850), Melozone albicollis (P.L.Sclater, 1858), Peucaea sumichrasti (Lawrence, 1871), Peucaea humeralis (Cabanis, 1851), Oriturus superciliosus (Swainson, 1838), Spizella wortheni Ridgway, 1884, Xenospiza baileyi Bangs, 1931, Junco insularis Ridgway, 1876, Icterus abeillei (Lesson, 1839), Geothlypis speciosa P.L.Sclater, 1859, Geothlypis beldingi Ridgway, 1882, Geothlypis flavovelata Ridgway, 1896, Geothlypis nelsoni Richmond, 1900, Piranga erythrocephala (Swainson, 1827), Rhodothraupis celaeno (Deppe, 1830), Granatellus venustus Bonaparte, 1850, Passerina rositae (Lawrence, 1874), Passerina leclancherii Lafresnaye, 1840, Tlacuatzin canescens (J.A.Allen, 1893), Lepus flavigularis Wagner, 1844, Lepus insularis W.Bryant, 1891, Romerolagus diazi (Ferrari-Pérez, 1893), Sylvilagus cunicularius (Waterhouse, 1848), Sylvilagus graysoni (J.A.Allen, 1877), Sylvilagus insonus (Nelson, 1904), Sylvilagus mansuetus Nelson, 1907, Cynomys leucurus Merriam, 1890, Callospermophilus madrensis (Merriam, 1901), Cynomys mexicanus Merriam, 1892, Tamias bulleri J.A.Allen, 1889, Tamias durangae (J.A.Allen, 1903), Notocitellus adocetus (Merriam, 1903), Notocitellus annulatus (Audubon & Bachman, 1842), Otospermophilus atricapillus (Bryant, 1889), Sciurus alleni Nelson, 1898, Sciurus colliaei Richardson, 1839, Sciurus oculatus Peters, 1863, Tamiasciurus mearnsi (Townsend, 1897), Xerospermophilus perotensis (Merriam, 1893), Dipodomys gravipes Huey, 1925, Dipodomys merriami Mearns, 1890, Dipodomys nelsoni Merriam, 1907, Dipodomys phillipsii Gray, 1841, Chaetodipus arenarius (Merriam, 1894), Chaetodipus artus (Osgood, 1900), Chaetodipus dalquesti (Roth, 1976), Chaetodipus goldmani (Osgood, 1900), Chaetodipus lineatus (Dalquest, 1951), Chaetodipus pernix (J.A.Allen, 1898), Cratogeomys fulvescens Merriam, 1895, Cratogeomys fumosus (Merriam, 1892), Cratogeomys goldmani Merriam, 1895, Cratogeomys merriami (Thomas, 1893), Cratogeomys perotensis Merriam, 1895, Cratogeomys planiceps (Merriam, 1895), Geomys tropicalis Goldman, 1915, Orthogeomys lanius (Elliot, 1905), Pappogeomys bulleri (Thomas, 1892), Thomomys atrovarius J.A.Allen, 1898, Thomomys nayarensis Mathis et al., 2013, Thomomys sheldoni Wied-Neuwied, 1839, Zygogeomys trichopus Merriam, 1895, Microtus oaxacensis Goodwin, 1966, Microtus quasiater (Coues, 1874), Microtus umbrosus Merriam, 1898, Habromys chinanteco (Robertson & Musser, 1976), Habromys ixtlani (Goodwin, 1964), Habromys lepturus (Merriam, 1898), Habromys simulatus (Osgood, 1904), Hodomys alleni (Merriam, 1892), Megadontomys cryophilus (Musser, 1964), Oryzomys nelsoni Merriam, 1898, Megadontomys thomasi (Merriam, 1898), Nelsonia goldmani Merriam, 1903, Nelsonia neotomodon Merriam, 1897, Neotoma angustapalata Baker, 1951, Neotoma bryanti Merriam, 1887, Neotoma goldmani Merriam, 1903, Neotoma palatina Goldman, 1905, Neotoma phenax (Merriam, 1903), Neotomodon alstoni Merriam, 1898, Oryzomys nelsoni Merriam, 1898, Osgoodomys banderanus (J.A.Allen, 1897), Peromyscus beatae Thomas, 1903, Peromyscus bullatus Osgood, 1904, Peromyscus caniceps Burt, 1932, Peromyscus dickeyi Burt, 1932, Peromyscus difficilis (J.A.Allen, 1891), Caryomys eva (Thomas, 1911), Peromyscus furvus J.A.Allen & Chapman, 1897, Peromyscus hooperi Lee & Schmidly, 1977, Peromyscus hylocetes Merriam, 1898, Peromyscus interparietalis Burt, 1932, Peromyscus levipes Merriam, 1898, Peromyscus megalops Merriam, 1898, Peromyscus melanophrys (Coues, 1874), Peromyscus melanurus Osgood, 1909, Peromyscus ochraventer Baker, 1951, Peromyscus perfulvus Osgood, 1945, Peromyscus polius Osgood, 1904, Peromyscus pseudocrinitus Burt, 1932, Peromyscus schmidlyi Bradley, 2004, Peromyscus sejugis Burt, 1932, Peromyscus simulus Osgood, 1904, Peromyscus slevini Mailliard, 1924, Peromyscus spicilegus J.A.Allen, 1897, Peromyscus stephani Townsend, 1912, Peromyscus winkelmanni Carleton, 1977, Peromyscus yucatanicus J.A.Allen & Chapman, 1897, Peromyscus zarhynchus Merriam, 1898, Reithrodontomys bakeri Bradley, Mendez-Harclerode, Hamilton & Ceballos, 2004, Reithrodontomys chrysopsis Merriam, 1900, Reithrodontomys hirsutus Merriam, 1901, Reithrodontomys spectabilis Jones & Lawlor, 1965, Rheomys mexicanus Goodwin, 1959, Sigmodon alleni Bailey, 1902, Sigmodon leucotis Bailey, 1902, Sigmodon mascotensis J.A.Allen, 1897, Tylomys bullaris Merriam, 1901, Tylomys tumbalensis Merriam, 1901, Xenomys nelsoni Merriam, 1892, Dasyprocta mexicana Saussure, 1860, Cryptotis alticola (Merriam, 1895), Cryptotis goldmani (Merriam, 1895), Cryptotis magna (Merriam, 1895), Cryptotis mexicana (Coues, 1877), Cryptotis nelsoni (Merriam, 1895), Cryptotis obscura (Merriam, 1895), Cryptotis peregrina (Merriam, 1895), Cryptotis phillipsii (Schaldach, 1966), Megasorex gigas (Merriam, 1897), Notiosorex evotis (Coues, 1877), Sorex emarginatus Jackson, 1925, Sorex ixtlanensis Carraway, 2007, Sorex macrodon Merriam, 1895, Sorex milleri Jackson, 1947, Sorex oreopolus Merriam, 1892, Sorex orizabae Merriam, 1895, Sorex stizodon Merriam, 1895, Sorex ventralis Merriam, 1895, Sorex veraecrucis Jackson, 1925, Spilogale pygmaea Thomas, 1898, Procyon pygmaeus Merriam, 1901, Glossophaga morenoi Martínez & Villa-R., 1938, Musonycteris harrisoni Schaldach & McLaughlin, 1960, Artibeus hirsutus K.Andersen, 1906, Cynomops mexicanus (Jones & Genoways, 1967), Myotis findleyi Bogan, 1978, Myotis peninsularis Miller, 1898, Myotis planiceps Baker, 1955, Myotis vivesi Menegaux, 1901, Corynorhinus mexicanus G.M.Allen, 1916, Rhogeessa aenea Goodwin, 1958, Rhogeessa genowaysi Baker, 1984, Rhogeessa mira LaVal, 1973, Rhogeessa parvula H.Allen, 1866, Anaxyrus compactilis (Wiegmann, 1833), Anaxyrus mexicanus (Brocchi, 1879), Anaxyrus kelloggi (Taylor, 1938), Incilius cristatus (Wiegmann, 1833), Incilius cavifrons (Firschein, 1950), Incilius canaliferus (Cope, 1877), Incilius spiculatus (Mendelson, 1997), Incilius tutelarius (Mendelson, 1997), Incilius gemmifer (Taylor, 1940), Craugastor batrachylus (Taylor, 1940), Craugastor decoratus (Taylor, 1942), Craugastor hobartsmithi (Taylor, 1937), Craugastor guerreroensis (Lynch, 1967), Craugastor megalotympanum (Shannon & Werler, 1955), Craugastor mexicanus (Brocchi, 1877), Craugastor omiltemanus (Günther, 1900), Craugastor montanus (Taylor, 1942), Craugastor pelorus (Campbell & Savage, 2000), Craugastor pozo (Johnson & Savage, 1995), Craugastor polymniae (Campbell, Lamar & Hillis, 1989), Craugastor spatulatus (Smith, 1939), Craugastor stuarti (Lynch, 1967), Craugastor occidentalis (Taylor, 1941), Craugastor rhodopis (Cope, 1867), Craugastor rugulosus (Cope, 1870), Craugastor saltator (Taylor, 1941), Craugastor tarahumaraensis (Taylor, 1940), Craugastor vocalis (Taylor, 1940), Craugastor vulcani (Shannon & Werler, 1955), Craugastor y
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.001 | 0.006 |
| Meta-epidemiology (narrow) | 0.002 | 0.001 |
| Meta-epidemiology (broad) | 0.002 | 0.002 |
| Bibliometrics | 0.007 | 0.011 |
| Science and technology studies | 0.001 | 0.000 |
| Scholarly communication | 0.004 | 0.004 |
| Open science | 0.003 | 0.004 |
| Research integrity | 0.002 | 0.002 |
| Insufficient payload (model declined to judge) | 0.323 | 0.454 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".